Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01439 and RBAM_008760

See DNA alignment / Visit BSNT_01439 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:09
# Commandline: needle
#    -asequence pep-align/BSNT_01439.1.9828.seq
#    -bsequence pep-align/RBAM_008760___ygaB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01439-RBAM_008760___ygaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01439-RBAM_008760___ygaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01439
# 2: RBAM_008760___ygaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 105
# Identity:      64/105 (61.0%)
# Similarity:    77/105 (73.3%)
# Gaps:          19/105 (18.1%)
# Score: 322.0
# 
#
#=======================================

BSNT_01439         1 MIKGGNVYTFIRLKEEPMTEFEKLVSEQMKTMDKLLDLQSELDRCKQIEA     50
                                      |:|||||||||||.||:||:||||||||:|:||
RBAM_008760__      1 -----------------MSEFEKLVSEQMKIMDQLLELQSELDRCRQVEA     33

BSNT_01439        51 ELRHLERDARLRGIQAEIAVKRKHLADIQDMFQKQTEQVIRSYRSSEKPS    100
                     ||..|||||:|..:|.|||.|||.||.||::||:||||||:||||:||||
RBAM_008760__     34 ELISLERDAKLDNVQDEIATKRKDLAGIQELFQRQTEQVIQSYRSTEKPS     83

BSNT_01439       101 SFV--    103
                     |:|  
RBAM_008760__     84 SYVQK     88


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