Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01439 and RBAM_008760

See Amino acid alignment / Visit BSNT_01439 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:09
# Commandline: needle
#    -asequence dna-align/BSNT_01439.1.9828.seq
#    -bsequence dna-align/RBAM_008760___ygaB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01439-RBAM_008760___ygaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01439-RBAM_008760___ygaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01439
# 2: RBAM_008760___ygaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 325
# Identity:     206/325 (63.4%)
# Similarity:   206/325 (63.4%)
# Gaps:          71/325 (21.8%)
# Score: 793.0
# 
#
#=======================================

BSNT_01439         1 ATGATTAAAGGAGGAAATGTTTATACTTTCATCAGGCTGAAGGAGGAACC     50
                                                                       
RBAM_008760__      0 --------------------------------------------------      0

BSNT_01439        51 GATGACCGAATTTGAAAAGCTGGTAAGTGAACAGATGAAAACGATGGATA    100
                      |||.|.||.|||||||||||.|||||||||||||||||||..||||||.
RBAM_008760__      1 -ATGTCAGAGTTTGAAAAGCTTGTAAGTGAACAGATGAAAATCATGGATC     49

BSNT_01439       101 AGCTTCTCGATCTCCAATCAGAGCTCGACCGCTGCAAACAAATTGAGGCG    150
                     ||||||||||.||.||.|||||.||.|||||||||...||..|.||.|||
RBAM_008760__     50 AGCTTCTCGAGCTGCAGTCAGAACTTGACCGCTGCCGGCAGGTGGAAGCG     99

BSNT_01439       151 GAACTC--CGGCATTTGGAAAGGGATGCAAGGCTGCGTGGGA-----TTC    193
                     ||||||  |.|  |.|||||||.|||||||.|||     |||     |.|
RBAM_008760__    100 GAACTCATCAG--TCTGGAAAGAGATGCAAAGCT-----GGACAATGTAC    142

BSNT_01439       194 AGGCTGAAATTGCGGTAAAACGGAAACACCTTGCCGATATACAGGATATG    243
                     |||..|||||||||..|||.||.|||.||||.||||..||||||||..|.
RBAM_008760__    143 AGGACGAAATTGCGACAAAGCGAAAAGACCTGGCCGGCATACAGGAGTTA    192

BSNT_01439       244 TTTCAAAAGCAGACAGAGCAGGTCATTCGTTCATATCGCAGCTCAGAAAA    293
                     ||.||||.||||||||||||.|||||.|..||.|||||||||.|.|||||
RBAM_008760__    193 TTCCAAAGGCAGACAGAGCAAGTCATCCAGTCTTATCGCAGCACGGAAAA    242

BSNT_01439       294 GCCGTCTTCCTTTGTGTAG------    312
                     |||||||||||.||||.||      
RBAM_008760__    243 GCCGTCTTCCTATGTGCAGAAATGA    267


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