Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01437 and RBAM_008750

See DNA alignment / Visit BSNT_01437 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:09
# Commandline: needle
#    -asequence pep-align/BSNT_01437___sspE.1.9828.seq
#    -bsequence pep-align/RBAM_008750___sspE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01437___sspE-RBAM_008750___sspE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01437___sspE-RBAM_008750___sspE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01437___sspE
# 2: RBAM_008750___sspE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 84
# Identity:      46/84 (54.8%)
# Similarity:    53/84 (63.1%)
# Gaps:          28/84 (33.3%)
# Score: 208.0
# 
#
#=======================================

BSNT_01437___      1 MANSNNFSKTNAQQVRKQNQQSAAGQGQFGTEFASETNAQQVRKQNQQSA     50
                     |||| .:|||:.|||::||||||:|                         
RBAM_008750__      1 MANS-KYSKTDVQQVKRQNQQSASG-------------------------     24

BSNT_01437___     51 GQQGQFGTEFASETDAQQVRQQNQSAEQNKQQNS     84
                       |||:||||.|||||||||:|||||||||||||
RBAM_008750__     25 --QGQYGTEFGSETDAQQVRKQNQSAEQNKQQNS     56


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