Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01432 and RBAM_008700

See DNA alignment / Visit BSNT_01432 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:08
# Commandline: needle
#    -asequence pep-align/BSNT_01432___yfhO.1.9828.seq
#    -bsequence pep-align/RBAM_008700___fhO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01432___yfhO-RBAM_008700___fhO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01432___yfhO-RBAM_008700___fhO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01432___yfhO
# 2: RBAM_008700___fhO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 863
# Identity:     558/863 (64.7%)
# Similarity:   700/863 (81.1%)
# Gaps:           4/863 ( 0.5%)
# Score: 3001.0
# 
#
#=======================================

BSNT_01432___      1 MKRKHIMIYAASLLVSVLAHAFFVKEWAEGRYMTGPGDGLAQMIVFKKLL     50
                     ||:...::.||.:|.:..||.||:|||:..|||||.|||:|||.||||||
RBAM_008700__      1 MKKNKWILPAACVLAAAAAHIFFLKEWSADRYMTGSGDGIAQMAVFKKLL     50

BSNT_01432___     51 FDQYTHGNFFYNYSFGLGGGTFSQLGYYFSASFLFLAVSAAVWMLQAVQL    100
                     ||||.:|..||:||||||||.:||||||||.|||||.:||||..||.:||
RBAM_008700__     51 FDQYMNGRLFYSYSFGLGGGVYSQLGYYFSTSFLFLFISAAVRFLQLIQL    100

BSNT_01432___    101 IGEADTLFWAESAVFISIFKLSLIIFTSASVFHYLIKHRAASFTGAVLYG    150
                     .||||.||||:::||||..|.|.||||:|.||.|.:|....:|.||||||
RBAM_008700__    101 TGEADALFWAQASVFISFAKQSFIIFTAACVFRYFVKRTVPAFAGAVLYG    150

BSNT_01432___    151 VSIIYFRHEAYWEFFTDTMVWLPLLVLGAEKIIRERRPAWFIVACSLTLI    200
                     |||||||||.||:||||:|||||||||||||||||::|||||.||:||||
RBAM_008700__    151 VSIIYFRHEVYWDFFTDSMVWLPLLVLGAEKIIREKKPAWFIFACALTLI    200

BSNT_01432___    201 NNFYFAYINLIFIGIYVLFRWLISLEPHEEKRWIQIRLFLVSGFISFGIS    250
                     ||||||||||||||||:||||:|.||.:|.||..|.|:|::||.:.||||
RBAM_008700__    201 NNFYFAYINLIFIGIYILFRWVIPLEGNETKRLTQCRIFILSGLLGFGIS    250

BSNT_01432___    251 AAAFVPVVYGFLNNLRPPYSQKIEWLNFDDNILFSSRIIIVPAAFLLFLF    300
                     |.:|:|||||:|:|||||||:.|.||:|.|||||||||||:|||||||||
RBAM_008700__    251 AVSFIPVVYGYLHNLRPPYSEHIAWLDFSDNILFSSRIIILPAAFLLFLF    300

BSNT_01432___    301 MISFYKNRVFRLFAGLSLLFILFHFSPYAASVFNGFSAPQNRFEYILAFT    350
                     ..:.||||:||||||:|||:|||||||:|||.|||||||||||||:|.||
RBAM_008700__    301 TFTLYKNRLFRLFAGISLLYILFHFSPFAASAFNGFSAPQNRFEYVLCFT    350

BSNT_01432___    351 IAGAAAAGLSQLSELKRKELLPAAAVVLLLYLYHIQRYKLDIWKPANESI    400
                     |||..:.|||:||::..|.:|.:|.:|:|||...::||.|||...||..:
RBAM_008700__    351 IAGTVSVGLSKLSDISMKSMLMSAVLVVLLYWSQVRRYSLDISDHANLPV    400

BSNT_01432___    401 LLLLLMTIAALFAAAFAKKRAKMAVYGIIILSSLFVANSYQKYALSEGGD    450
                     :|||:::|||.|||....|.|..|||.:|:|:::..||:|:||||||||.
RBAM_008700__    401 ILLLVLSIAAFFAAKTRLKGAVPAVYAVILLTAVLTANTYEKYALSEGGK    450

BSNT_01432___    451 LDSVTKEYLTSEEYRGRESSELIRRLQKEDDDPLMRIDWMNGVRNNTPII    500
                     :.:|:..::|..:|:|:|.||||:||:::|.||..|:||||||.||||||
RBAM_008700__    451 IYTVSHTFMTGADYKGKEQSELIQRLKEKDPDPFARLDWMNGVFNNTPII    500

BSNT_01432___    501 YGFNGFSAYSSILNKDLLAFYWNDLSIDMGRESVSRYASLGDRANLYSLL    550
                     |||||||.||||||::||:|||:||.||||||||||||:||:||||||||
RBAM_008700__    501 YGFNGFSVYSSILNRNLLSFYWHDLQIDMGRESVSRYATLGNRANLYSLL    550

BSNT_01432___    551 YGKYYMTEKTNEASVPYGFKKHLETEHYAVYENQYMLPFVKTADAIYSES    600
                     |||||||||||||.|||||||.:|:.|||||:||||||||:|||.:|:|.
RBAM_008700__    551 YGKYYMTEKTNEAGVPYGFKKIMESTHYAVYQNQYMLPFVRTADRVYNEG    600

BSNT_01432___    601 ELDRLPALAKEQAMLKGIILKDPSGKTEQTPKQSNLITKSDITAKQAQYQ    650
                     .|.:.||||:|:|||.||:::..:..|::.|:..|:|.::::.|:...|.
RBAM_008700__    601 GLKKAPALARERAMLDGIVMESSTTNTKKAPEAKNMIRRTEVAAEHGDYH    650

BSNT_01432___    651 NGLLTVTGENGGELIITPKQPSSAPGDYYVSFYLKSKAKDRGFALKVNDY    700
                     ||:||| .|:||.|:|||:......||||||||||:||||:||.||||||
RBAM_008700__    651 NGILTV-NEDGGGLVITPQAAKMDSGDYYVSFYLKNKAKDQGFTLKVNDY    699

BSNT_01432___    701 VTTRKSNKSIYKTGVNNITVRVPKSGHISINLPKGTYELRNIALYEENYQ    750
                     .||||||:||||||||::||||||:.:|.|.||||:|:|..:|||||.|.
RBAM_008700__    700 TTTRKSNQSIYKTGVNDVTVRVPKTKNIQIRLPKGSYQLDRLALYEERYD    749

BSNT_01432___    751 TLKNAVMQNKTEKADKLNWNKNRLTFAY-HLSKDQYIMLPIPYEKGWELK    799
                     |||:|..:.:.|....|:|..|.|..:| :.::..|||||||||||||||
RBAM_008700__    750 TLKSAYRKAEKEPRADLSWRGNTLHISYENKTRAPYIMLPIPYEKGWELK    799

BSNT_01432___    800 INGKTQKIEKADYAFIGFKAQKGDNHIELTYYPPYFKISAIISLVSLLLA    849
                     |||:.::||||||:|||||||||.|.|:||||||:||.:|.:|::||:.:
RBAM_008700__    800 INGRQEQIEKADYSFIGFKAQKGKNDIQLTYYPPFFKPAAALSVISLVFS    849

BSNT_01432___    850 VFYIRR-KKPGSI    861
                     ..|:|| ||||| 
RBAM_008700__    850 AIYVRRQKKPGS-    861


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01432 and RBAM_008700

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
