Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01425 and RBAM_008660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:07
# Commandline: needle
# -asequence pep-align/BSNT_01425___yfhK.1.9828.seq
# -bsequence pep-align/RBAM_008660___yfhK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01425___yfhK-RBAM_008660___yfhK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01425___yfhK-RBAM_008660___yfhK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01425___yfhK
# 2: RBAM_008660___yfhK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity: 93/177 (52.5%)
# Similarity: 114/177 (64.4%)
# Gaps: 7/177 ( 4.0%)
# Score: 457.0
#
#
#=======================================
BSNT_01425___ 1 MKKKQVMLALTAAAGL-----GLTALHSAPAAKAAPLHDISVSMPSSDTY 45
|..|:.:.|...|||| |.|.... |||.||.:|...:. .::|||
RBAM_008660__ 1 MNMKKGLTAFIPAAGLCLFLAGGTVFFD-PAANAAAVHQTKID-TAADTY 48
BSNT_01425___ 46 IIKAGKLNVRTEPNHEGDILGTVSSEQKVKVDRFVNADWAQIHFKGKKAY 95
|:|||:||||.|||.:|.|:||:.||..|||.|...||||:|.:||.|||
RBAM_008660__ 49 IVKAGELNVRKEPNKQGSIIGTLRSEDSVKVKRLQGADWAEIDYKGHKAY 98
BSNT_01425___ 96 ISTHFLMKTASQAKTTKQTAFYAPTPENGKAKQLSSGTEVTILGWGFSEN 145
||||||||...:|.|.||||||.||.|.||...:.:|..|.:||||||.:
RBAM_008660__ 99 ISTHFLMKQPVKAVTAKQTAFYTPTLETGKKGSVKAGETVNVLGWGFSHD 148
BSNT_01425___ 146 GGFDFTWAFVDYGGVKGYIHTKDLQMR 172
||||..||:|.|||..||:.|.||..:
RBAM_008660__ 149 GGFDRKWAYVTYGGKAGYVKTADLTQK 175
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