Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01422 and RBAM_008640

See DNA alignment / Visit BSNT_01422 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence pep-align/BSNT_01422___sspK.1.9828.seq
#    -bsequence pep-align/RBAM_008640___sspK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01422___sspK-RBAM_008640___sspK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01422___sspK-RBAM_008640___sspK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01422___sspK
# 2: RBAM_008640___sspK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 50
# Identity:      43/50 (86.0%)
# Similarity:    46/50 (92.0%)
# Gaps:           0/50 ( 0.0%)
# Score: 233.0
# 
#
#=======================================

BSNT_01422___      1 MVRNKEKGFPYENENKFQGEPRAKDDYASKRADGSINQHPQERMRASGKR     50
                     |||||.||||.:|.|||:|||||||||||||||||||.||||||||||:|
RBAM_008640__      1 MVRNKAKGFPNQNNNKFEGEPRAKDDYASKRADGSINSHPQERMRASGRR     50


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.