Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01422 and RBAM_008640

See Amino acid alignment / Visit BSNT_01422 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence dna-align/BSNT_01422___sspK.1.9828.seq
#    -bsequence dna-align/RBAM_008640___sspK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01422___sspK-RBAM_008640___sspK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01422___sspK-RBAM_008640___sspK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01422___sspK
# 2: RBAM_008640___sspK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 153
# Identity:     118/153 (77.1%)
# Similarity:   118/153 (77.1%)
# Gaps:           0/153 ( 0.0%)
# Score: 450.0
# 
#
#=======================================

BSNT_01422___      1 ATGGTCCGAAATAAAGAAAAAGGATTTCCTTACGAAAACGAAAACAAATT     50
                     ||||||||.||.||.|.|||||||||||||.|..|.|||.|.||.||.||
RBAM_008640__      1 ATGGTCCGGAACAAGGCAAAAGGATTTCCTAATCAGAACAATAATAAGTT     50

BSNT_01422___     51 TCAGGGTGAACCGAGAGCAAAGGACGACTATGCTTCAAAGCGTGCTGACG    100
                     |.|.||.||||||.|.||||||||.|||||.|||||.||.||.||.||||
RBAM_008640__     51 TGAAGGCGAACCGCGGGCAAAGGATGACTACGCTTCTAAACGGGCGGACG    100

BSNT_01422___    101 GATCTATCAATCAGCATCCTCAAGAAAGAATGAGAGCCTCAGGCAAACGG    150
                     |.||.||.|||..|||.||.||||||.|.||||||||.|||||||.|||.
RBAM_008640__    101 GTTCAATTAATTCGCACCCGCAAGAACGCATGAGAGCTTCAGGCAGACGA    150

BSNT_01422___    151 TAA    153
                     |||
RBAM_008640__    151 TAA    153


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