Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00404 and RBAM_008630

See DNA alignment / Visit BSNT_00404 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:10
# Commandline: needle
#    -asequence pep-align/BSNT_00404___mpr.1.9828.seq
#    -bsequence pep-align/RBAM_008630___mpr.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00404___mpr-RBAM_008630___mpr.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00404___mpr-RBAM_008630___mpr.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00404___mpr
# 2: RBAM_008630___mpr
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 313
# Identity:     221/313 (70.6%)
# Similarity:   253/313 (80.8%)
# Gaps:          10/313 ( 3.2%)
# Score: 1170.0
# 
#
#=======================================

BSNT_00404___      1 MKLVPRFRKQWFAYLTVLCLALAAAVSFGVPAKAAENPQTSVSNTGKEGD     50
                     ||.|.:......|:|..:.|       |.|.|:||.:|||||||:|:|.|
RBAM_008630__      1 MKTVSKRLLSLTAFLLSVSL-------FAVSAEAAGSPQTSVSNSGEEFD     43

BSNT_00404___     51 ATKNQTSKAEQVSAPYEGIGKTSKSLYGGQTELEKNIQTLQPSSIIGTDE    100
                     |.:||..:..|.|..|||.|.|.:.|....|   .:|::|:|||||||||
RBAM_008630__     44 AHQNQPVQTTQTSPAYEGTGLTKRQLAQNST---ADIKSLKPSSIIGTDE     90

BSNT_00404___    101 RTRISSTTSFPYRATVQLSIKYPNTSSTYGCTGFLINPNTVVTAGHCVYS    150
                     |.|||.|||||||||.||::.|..::||||||||.:|.:|:||||||||.
RBAM_008630__     91 RIRISPTTSFPYRATAQLTVTYSGSTSTYGCTGFFVNADTIVTAGHCVYD    140

BSNT_00404___    151 QDHGWASTITAAPGRNGSSYPYGTYSGTMFYSVKGWTESKDTNYDYGAIK    200
                     |.:||||.|||||||||||||||:|||..|||||||||:.||||||||||
RBAM_008630__    141 QKNGWASKITAAPGRNGSSYPYGSYSGKTFYSVKGWTENGDTNYDYGAIK    190

BSNT_00404___    201 LNGSPGNTVGWYGYRTTNSSSPVGLSSSVTGFPCDKTFGTMWSDTKPIRS    250
                     :|||||||||||||||||||||.||||:|||:||||..|:||||:|||||
RBAM_008630__    191 VNGSPGNTVGWYGYRTTNSSSPAGLSSTVTGYPCDKVSGSMWSDSKPIRS    240

BSNT_00404___    251 AETYKLTYTTDTYGCQSGSPVYRNYSDTGQTAIAIHTNGGSSYNLGTRVT    300
                     ||||||||||||:|||||||||||||||||||||||||||||||||||||
RBAM_008630__    241 AETYKLTYTTDTFGCQSGSPVYRNYSDTGQTAIAIHTNGGSSYNLGTRVT    290

BSNT_00404___    301 NDVFNNIQYWANQ    313
                     |.||:|||||:||
RBAM_008630__    291 NSVFDNIQYWSNQ    303


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