Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00404 and RBAM_008630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_00404___mpr.1.9828.seq
# -bsequence dna-align/RBAM_008630___mpr.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00404___mpr-RBAM_008630___mpr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00404___mpr-RBAM_008630___mpr.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00404___mpr
# 2: RBAM_008630___mpr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 992
# Identity: 664/992 (66.9%)
# Similarity: 664/992 (66.9%)
# Gaps: 130/992 (13.1%)
# Score: 2206.5
#
#
#=======================================
BSNT_00404___ 1 ATGAAATTAGTTCCAAGATTCAGAAAACAATGGTTCGCTTA--CTTAACG 48
|||||...||||.| ||||| |.|.|||.| ||||.||
RBAM_008630__ 1 ATGAAGACAGTTTC---------AAAAC----GATTGCTGAGCCTTACCG 37
BSNT_00404___ 49 GTTTTGTGTTTGGCTT--TGGCAGCAGCGGTTTC---TTTTGGCGTACCG 93
..|| ||| ||.|| ||||| .||||..||..|.
RBAM_008630__ 38 CATT---------CTTACTGTCA------GTTTCATTATTTGCTGTTTCA 72
BSNT_00404___ 94 GCAAAAGC----GGCAGAGAACCCGCAAACTTCTGTATCGAATACCGGTA 139
|||.|||| ||||| ||||||.||.||||||||.||.|.||||.
RBAM_008630__ 73 GCAGAAGCAGCGGGCAG----CCCGCAGACATCTGTATCAAACAGCGGTG 118
BSNT_00404___ 140 AAGAAGGTGATGCTACGAAAAACCAAACGTCAAAAGCAG----------- 178
|.||...|||.|| ||.|||.||.|||
RBAM_008630__ 119 AGGAGTTTGACGC-------------ACATCAGAATCAGCCTGTACAAAC 155
BSNT_00404___ 179 --AACAGGTTTCTGCCCCTTATGAGGGAATCGG---------AAAAACAA 217
.||||...||..||.|||||||.|||| ||| |||.|||.
RBAM_008630__ 156 AACACAGACATCCCCCGCTTATGAAGGAA-CGGGCCTCACCAAAAGACAG 204
BSNT_00404___ 218 GT-----AAATCGTTATACGGCGGCCAAACGGAACTGGAGAAAAACATTC 262
.| ||| ||.|| || |.||| ||| ||
RBAM_008630__ 205 CTTGCACAAA-------ACAGC------AC--AGCTG-------ACA-TC 231
BSNT_00404___ 263 AA-ACTTTACAGCCTTCGAGCATTATCGGAACTGATGAACGCACCAGAA- 310
|| .|.|||.|||||||.||.|||||.||.||.||.|||||.|.|||||
RBAM_008630__ 232 AAGTCATTAAAGCCTTCCAGTATTATTGGGACAGACGAACGAATCAGAAT 281
BSNT_00404___ 311 -TCTCCAGCACGACATCTTTTCCATATAGAGCAACCGTTCAACTGTCAAT 359
||||| .||.|||||.|||||||||.||||.||.|..||.|||.|..|
RBAM_008630__ 282 TTCTCC--TACAACATCATTTCCATATCGAGCGACAGCACAGCTGACCGT 329
BSNT_00404___ 360 CAAGTATCC-----CAACACTTCAAGCACTTATGGATGTACCGGATTTTT 404
.| .||.| ||.|| |||||||.||.|||||.|||||.|||||
RBAM_008630__ 330 TA--CATACAGCGGCAGCA---CAAGCACCTACGGATGCACCGGTTTTTT 374
BSNT_00404___ 405 AATCAATCCAAATACAGTCGTCACGGCTGGACATTGTGTGTACAGCCAGG 454
..|||||.|..|.||..||||.|||||.||||||||.|||||...||||.
RBAM_008630__ 375 TGTCAATGCCGACACGATCGTTACGGCGGGACATTGCGTGTATGACCAGA 424
BSNT_00404___ 455 ATCATGGATGGGCTTCGACGATAACCGCCGCGCCGGGCCGCAATGGCTCG 504
|..|.||.|||||.||||..||.||.||.||.|||||||||||.||.||.
RBAM_008630__ 425 AAAACGGCTGGGCATCGAAAATTACGGCAGCTCCGGGCCGCAACGGATCA 474
BSNT_00404___ 505 TCATATCCGTACGGTACTTATTCAGGCACGATGTTTTACTCCGTCAAAGG 554
||.||.||||||||..||||||||||||.||..||.|||...||||||||
RBAM_008630__ 475 TCGTACCCGTACGGCTCTTATTCAGGCAAGACATTCTACAGTGTCAAAGG 524
BSNT_00404___ 555 ATGGACGGAAAGCAAA----GACACCAATTATGATTACGGAGCTATTAAA 600
.||||| ||.||| |||||.||.||.||.|||||.||.||.|||
RBAM_008630__ 525 GTGGAC----AGAAAATGGTGACACAAACTACGACTACGGCGCAATCAAA 570
BSNT_00404___ 601 TTAAACGGTTCTCCTGGAAACACGGTTGGCTGGTACGGCTACCGGACTAC 650
.|||||||.||.||.||.||.||.||.||||||||||||||||||||.||
RBAM_008630__ 571 GTAAACGGGTCGCCCGGGAATACCGTCGGCTGGTACGGCTACCGGACGAC 620
BSNT_00404___ 651 AAACAGCAGCAGTCCCGTGGGCCTTTCCTCGTCAGTGACAGGATTCCCGT 700
.|||||...||||||.|..||.||||||||..|.||||||||||..||||
RBAM_008630__ 621 CAACAGTTCCAGTCCGGCCGGGCTTTCCTCAACCGTGACAGGATATCCGT 670
BSNT_00404___ 701 GTGACAAAACCTTTGGCACGATGTGGTCTGATACAAAGCCGATTCGCTCC 750
|.||||||...|..||..|.||||||||.||.|..|||||||||||.||.
RBAM_008630__ 671 GCGACAAAGTGTCCGGTTCCATGTGGTCGGACAGCAAGCCGATTCGTTCT 720
BSNT_00404___ 751 GCTGAAACGTATAAGCTGACCTATACAACCGATACGTACGGCTGCCAAAG 800
||.||.||.|||||.||.||.||.||.||.|||||||.|||||||||.||
RBAM_008630__ 721 GCCGAGACATATAAACTCACTTACACGACAGATACGTTCGGCTGCCAGAG 770
BSNT_00404___ 801 CGGCTCGCCTGTTTATCGAAACTACAGTGATACAGGGCAGACAGCTATTG 850
|||.|||||.|||||.||.||.|||||.||.||.||.|||||.||.||||
RBAM_008630__ 771 CGGATCGCCCGTTTACCGCAATTACAGCGACACCGGCCAGACCGCCATTG 820
BSNT_00404___ 851 CCATTCACACGAACGGAGGATCGTCATATAACTTGGGAACAAGGGTGACG 900
|||||||.||.|||||.||.|||||.||.||..||||||||||||||||.
RBAM_008630__ 821 CCATTCATACAAACGGCGGGTCGTCTTACAATCTGGGAACAAGGGTGACA 870
BSNT_00404___ 901 AACGATGTATTCAACAATATTCAATATTGGGCAAATCAATAA 942
|||..|||||||.||||.||||||||||||.|||||||||||
RBAM_008630__ 871 AACAGTGTATTCGACAACATTCAATATTGGTCAAATCAATAA 912
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