Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01418 and RBAM_008600

See DNA alignment / Visit BSNT_01418 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence pep-align/BSNT_01418___yfhH.1.9828.seq
#    -bsequence pep-align/RBAM_008600___yfhH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01418___yfhH-RBAM_008600___yfhH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01418___yfhH-RBAM_008600___yfhH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01418___yfhH
# 2: RBAM_008600___yfhH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 104
# Identity:      76/104 (73.1%)
# Similarity:    90/104 (86.5%)
# Gaps:           0/104 ( 0.0%)
# Score: 400.0
# 
#
#=======================================

BSNT_01418___      1 MEKRYSQMTPHELNTEIALLSEKARKAEQHGIINELAVLERKITMAKAYL     50
                     |:|||||||||||.||||.|:||||||||.||:||||||||||||||||:
RBAM_008600__      1 MDKRYSQMTPHELQTEIAGLTEKARKAEQMGIVNELAVLERKITMAKAYM     50

BSNT_01418___     51 LNPEDYSPGETYRVENTEDEFTISYLNGVFAWGYRTSSPQQEEALPISVL    100
                     |||||:.||..|::|.::|.|.|.|:|||||||:|:|....|||||||||
RBAM_008600__     51 LNPEDFRPGGVYQIEGSDDTFRIDYINGVFAWGHRSSPSDGEEALPISVL    100

BSNT_01418___    101 QEKE    104
                     :||:
RBAM_008600__    101 KEKK    104


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