Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01417 and RBAM_008590

See DNA alignment / Visit BSNT_01417 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence pep-align/BSNT_01417___recX.1.9828.seq
#    -bsequence pep-align/RBAM_008590___recX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01417___recX-RBAM_008590___recX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01417___recX-RBAM_008590___recX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01417___recX
# 2: RBAM_008590___recX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     208/264 (78.8%)
# Similarity:   241/264 (91.3%)
# Gaps:           1/264 ( 0.4%)
# Score: 1104.0
# 
#
#=======================================

BSNT_01417___      1 MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDI     50
                     ||||||||||||||||||||||:||||||||||||:|:||||||||:|||
RBAM_008590__      1 MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDI     50

BSNT_01417___     51 IEIQYGDEVKKGFNRALDFLSYRMRSTKEVEDHLKKKETSPPVIAEVIHR    100
                     :||||||:|||.||||::||||||||.|||.||||||||...||:||||:
RBAM_008590__     51 LEIQYGDDVKKAFNRAVEFLSYRMRSEKEVRDHLKKKETPDMVISEVIHK    100

BSNT_01417___    101 LNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALS    150
                     |.||:||||:|||.||.||||||||||||||||||:|||||||||||.||
RBAM_008590__    101 LYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLS    150

BSNT_01417___    151 SFSFEDQTREAVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISA    200
                     :|:|::|.:||:||:.|:|||||||||||.:||||:|||||||.||||:|
RBAM_008590__    151 AFTFDEQIQEALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINA    200

BSNT_01417___    201 AMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIKVKQFLFRKGF    250
                     |::|.|||||::.|.|||:.|||||.|||||||||||.:||||:||||||
RBAM_008590__    201 ALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMKVKQYLFRKGF    250

BSNT_01417___    251 SLDLIEQLLQEEEY    264
                     |:|.|:|.||||| 
RBAM_008590__    251 SIDDIDQFLQEEE-    263


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