Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01416 and RBAM_008580

See DNA alignment / Visit BSNT_01416 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence pep-align/BSNT_01416___yfhF.1.9828.seq
#    -bsequence pep-align/RBAM_008580___yfhF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01416___yfhF-RBAM_008580___yfhF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01416___yfhF-RBAM_008580___yfhF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01416___yfhF
# 2: RBAM_008580___yfhF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     229/303 (75.6%)
# Similarity:   269/303 (88.8%)
# Gaps:           4/303 ( 1.3%)
# Score: 1249.0
# 
#
#=======================================

BSNT_01416___      1 MNIAMTGGTGFLGQHLTGVLTRQGHHVYILSRNAREAEQKNMTYVQWLSE     50
                     |||||||||||||:|||||.||:|||||||||..||.||||:||||||:|
RBAM_008580__      1 MNIAMTGGTGFLGRHLTGVFTRRGHHVYILSRKQRETEQKNVTYVQWLAE     50

BSNT_01416___     51 GAAPEQELPHIDVWINLAGKSIFGRWTEKTKQHILSSRINATREVQRLIQ    100
                     .||||:|||.||||:||||||||.|||:.||:.|:|||:.|||||:|:::
RBAM_008580__     51 NAAPERELPPIDVWVNLAGKSIFDRWTDTTKEQIISSRLEATREVRRIMK    100

BSNT_01416___    101 KQKEKPQTLIQASAVGIYGTSLEKTFTEDSATSDEDFLSHTAHLWEKEGQ    150
                     :|.:||:.|||||||||||||.||||||.|.||:|||||||||:||:|||
RBAM_008580__    101 QQPKKPRALIQASAVGIYGTSTEKTFTEQSDTSNEDFLSHTAHMWEREGQ    150

BSNT_01416___    151 HIEAMGIRTVYARFGVMLGEKGALPLMILPYKFLAGGTIGTGRQWLSWIH    200
                     .|||:||||||||||||||||||||||:||||.|||||||:|||||||:|
RBAM_008580__    151 KIEALGIRTVYARFGVMLGEKGALPLMVLPYKLLAGGTIGSGRQWLSWVH    200

BSNT_01416___    201 VEDAAQMIRYAVENAGISGPMNVTAPNPVDMKQFGKTIARVKHRPHWLPV    250
                     |:|||::|.:|.|:..:|||||||:||||:|||||||||.|.|||||:||
RBAM_008580__    201 VDDAAELIAFAAEHDDLSGPMNVTSPNPVEMKQFGKTIAGVLHRPHWIPV    250

BSNT_01416___    251 PEFFLSKALGEMSLLIVKGQRALPKKAITSGFRFTYSDLEFALSQLIADR    300
                     ||.||.|||||||||||||||||||:|:||||:|||.:|:.||..|::. 
RBAM_008580__    251 PELFLEKALGEMSLLIVKGQRALPKQALTSGFQFTYEELDSALKDLLSA-    299

BSNT_01416___    301 KTV    303
                        
RBAM_008580__    299 ---    299


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