Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01416 and RBAM_008580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:07
# Commandline: needle
# -asequence dna-align/BSNT_01416___yfhF.1.9828.seq
# -bsequence dna-align/RBAM_008580___yfhF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01416___yfhF-RBAM_008580___yfhF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01416___yfhF-RBAM_008580___yfhF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01416___yfhF
# 2: RBAM_008580___yfhF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 928
# Identity: 686/928 (73.9%)
# Similarity: 686/928 (73.9%)
# Gaps: 44/928 ( 4.7%)
# Score: 2502.0
#
#
#=======================================
BSNT_01416___ 1 ATGAATATCGCAATGACGGGCGGAACCGGTTTTCTCGGCCAGCATCTGAC 50
|||||||||||.|||||.|||||.||.||||||||.||||.|||||||||
RBAM_008580__ 1 ATGAATATCGCGATGACAGGCGGCACTGGTTTTCTGGGCCGGCATCTGAC 50
BSNT_01416___ 51 AGGCGTTCTTACCCGCCAGGGACACCATGTTTATATTTTATCAAGAAACG 100
|||.||..|||||||||.||||||.|||||.||||||||||||||||| .
RBAM_008580__ 51 AGGTGTGTTTACCCGCCGGGGACATCATGTCTATATTTTATCAAGAAA-A 99
BSNT_01416___ 101 CA-AGGGAAGCTGAACAAAAAAATATGACATATGTCCAATGGCTGTCGGA 149
|| ||.|||.|.||||||||||||.||||||||||.|||||||||.|.||
RBAM_008580__ 100 CAGAGAGAAACCGAACAAAAAAATGTGACATATGTTCAATGGCTGGCCGA 149
BSNT_01416___ 150 AGGAGCCGCACCGGAGCAGGAACTTCCTCATATTGATGTCTGGATAAACC 199
|...||.||.||.||||..||.|||||.|.|||||||||.|||.|.||||
RBAM_008580__ 150 AAACGCGGCGCCTGAGCGCGAGCTTCCCCCTATTGATGTATGGGTGAACC 199
BSNT_01416___ 200 TTGCGGGAAAATCGATTTTTGGCCGCTGGACGGAAAAAACGAAGCAGCAC 249
|.||.||.|||||.||.||||.||||||||||||.|.|||||||.|.||.
RBAM_008580__ 200 TCGCCGGCAAATCCATCTTTGACCGCTGGACGGACACAACGAAGGAACAA 249
BSNT_01416___ 250 ATTCTCTCCAGCCGTATCAATGCGACGCGTGAAGTGCAG-CGGCTTATTC 298
||..||||.|||.|..|..|.||||||.|.||||| ||| |||.||||
RBAM_008580__ 250 ATCATCTCAAGCAGACTAGAAGCGACGAGAGAAGT-CAGACGGATTAT-- 296
BSNT_01416___ 299 AGAAACAGAAGGAGAAGCCGCAGACAC---------TGATCCAAGCCAGT 339
||||.||.|||||.|.|.|| ||||.||.|||||.
RBAM_008580__ 297 -------GAAGCAGCAGCCGAAAAAACCCCGGGCTTTGATTCAGGCCAGC 339
BSNT_01416___ 340 GCCGTGGGTATTTACGGCACAAGCCTTGAGAAAACCTTTACAGAGGATTC 389
|||||.||.|||||||||||||||...||.|||||.||.||.||..|.||
RBAM_008580__ 340 GCCGTCGGCATTTACGGCACAAGCACAGAAAAAACGTTCACCGAACAGTC 389
BSNT_01416___ 390 TGCAACGTCAGATGAGGATTTTCTCAGCCATACTGCACACCTGTGGGAAA 439
.|..||||||.||||.|||||||||||.|||||.||.||..||||||||.
RBAM_008580__ 390 AGATACGTCAAATGAAGATTTTCTCAGTCATACGGCTCATATGTGGGAAC 439
BSNT_01416___ 440 AGGAAGGACAGCATATTGAGGCGATGGGCATCAGGACGGTTTATGCGAGA 489
..|||||.|||.|.|||||.|||.|.||||||.|||||||.|||||.|||
RBAM_008580__ 440 GTGAAGGCCAGAAAATTGAAGCGCTCGGCATCCGGACGGTATATGCCAGA 489
BSNT_01416___ 490 TTTGGCGTGATGCTTGGAGAAAAAGGCGCTCTCCCGCTCATGATTCTCCC 539
||.||.||||||||.||.|||||||||||.||.|||||||||.|||||||
RBAM_008580__ 490 TTCGGGGTGATGCTCGGTGAAAAAGGCGCCCTGCCGCTCATGGTTCTCCC 539
BSNT_01416___ 540 CTATAAGTTTCTGGCCGGCGGAACGATCGGAACGGGAAGGCAGTGGCTGT 589
.||||||.|..|.||||||||.||.|||||..|.|||.||||||||||||
RBAM_008580__ 540 TTATAAGCTGTTAGCCGGCGGCACCATCGGCTCTGGACGGCAGTGGCTGT 589
BSNT_01416___ 590 CATGGATTCATGTCGAGGATGCGGCCCAGATGATCCGATATGCGGTGGAA 639
|||||.|||||||.||.||.||.||..|..|.|||...|.|||||.|||.
RBAM_008580__ 590 CATGGGTTCATGTGGATGACGCCGCGGAACTCATCGCTTTTGCGGCGGAG 639
BSNT_01416___ 640 AACGCCGGCATCTCAGGCCCAATGAATGTCACCGCGCCCAATCCTGTGGA 689
.|.|..|.|.|.||.||.||.||||||||.||..||||.||.||.|||||
RBAM_008580__ 640 CATGATGACTTGTCCGGTCCCATGAATGTAACATCGCCGAACCCCGTGGA 689
BSNT_01416___ 690 CATGAAGCAATTCGGAAAAACGATTGCACGGGTGAAGCACCGCCCGCACT 739
.|||||||||||||||||.|||||.|||.|.||...|||||||||.||.|
RBAM_008580__ 690 AATGAAGCAATTCGGAAAGACGATCGCAGGCGTCCTGCACCGCCCCCATT 739
BSNT_01416___ 740 GGCTCCCCGTCCCGGAATTCTTTTTAT--CAAAAGCATTGGGTGAAATGA 787
||.|.|||||.|||||| ||||||.| ..||.||.|||||.|||||||
RBAM_008580__ 740 GGATTCCCGTACCGGAA--CTTTTTCTGGAGAAGGCCTTGGGAGAAATGA 787
BSNT_01416___ 788 GTCTTTTGATTGTGAAAGGACAGCGCGCTCTTCCGAAAAAAGCGATAACC 837
|.||.|||||.||.|||||.||||||||.||.||.||..|.|||.|.||.
RBAM_008580__ 788 GCCTGTTGATCGTAAAAGGCCAGCGCGCCCTGCCTAAGCAGGCGCTGACA 837
BSNT_01416___ 838 TCTGGATTTCGTTTTACATATTCGGATCTTGAATTTGCACTCTCACAG-- 885
||.||.||||..|||||.|||...||.||||| ||.|.|| |.|.||
RBAM_008580__ 838 TCCGGTTTTCAATTTACGTATGAAGAACTTGA--TTCCGCT-TTAAAGGA 884
BSNT_01416___ 886 -CTCATAGCGGACCGAAAGACTGTATAA 912
|||.|| .|||.||||
RBAM_008580__ 885 TCTCTTA------------TCTGCATAA 900
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