Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01411 and RBAM_008550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:07
# Commandline: needle
# -asequence pep-align/BSNT_01411.1.9828.seq
# -bsequence pep-align/RBAM_008550___yfhC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01411-RBAM_008550___yfhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01411-RBAM_008550___yfhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01411
# 2: RBAM_008550___yfhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 106/194 (54.6%)
# Similarity: 124/194 (63.9%)
# Gaps: 38/194 (19.6%)
# Score: 565.0
#
#
#=======================================
BSNT_01411 1 --------------------------------------MLETAKYAPNHR 12
|||||.||||||
RBAM_008550__ 1 MPKTEQLQQNESLAHTIRNRRSIRSFKPETVPSEVILDMLETAVYAPNHR 50
BSNT_01411 13 VTEPWRFIYVSSETGKANLINTFAAFSMKSKPDMTEEKLQNFKNTLGRVP 62
:||||||||.:||.|||.|.:::.:|..|.|.|..|||.:|.:..|..||
RBAM_008550__ 51 LTEPWRFIYAASEAGKAKLADSYVSFFKKIKDDFNEEKERNMRKNLSAVP 100
BSNT_01411 63 GFLLVVFREDENERARDDDFAATSSLIQNLQLLAWEKGIGMVWKSGKILY 112
||||||.:|||||..|:|||||.|.:||||||||.|.|||||||||:|:|
RBAM_008550__ 101 GFLLVVLKEDENEFTRNDDFAALSGMIQNLQLLAHENGIGMVWKSGRIMY 150
BSNT_01411 113 DKEVHQAFGLQDNERFAAIIQTGYPDEAPEVKKRTPIRDRFTEM 156
||:|||.|||.||||||||||||||||.|:.|:|||.:..|||:
RBAM_008550__ 151 DKQVHQDFGLADNERFAAIIQTGYPDEQPKAKERTPAKSLFTEL 194
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