Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01410 and RBAM_008540

See DNA alignment / Visit BSNT_01410 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:06
# Commandline: needle
#    -asequence pep-align/BSNT_01410___yfhB.1.9828.seq
#    -bsequence pep-align/RBAM_008540___yfhB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01410___yfhB-RBAM_008540___yfhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01410___yfhB-RBAM_008540___yfhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01410___yfhB
# 2: RBAM_008540___yfhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     206/296 (69.6%)
# Similarity:   243/296 (82.1%)
# Gaps:           5/296 ( 1.7%)
# Score: 1099.5
# 
#
#=======================================

BSNT_01410___      1 MKEAEVLKYEAFTSSPGKGNPAGVVLQGDDYTEDEMQIIAERAGYSETSF     50
                     ||:|.|.|||||:..|..|||||:|..||||:::|||:|||.|||:||||
RBAM_008540__      1 MKQATVFKYEAFSDIPDLGNPAGIVFNGDDYSDEEMQMIAEMAGYNETSF     50

BSNT_01410___     51 IRKSESADLELRYFTPGHEMNLCGHATVASLYALCEKGMLESGKTYSIQT    100
                     :.||..|||.:|||||||||||||||||||||||.|||.|::.:||.|:|
RBAM_008540__     51 LCKSGEADLRIRYFTPGHEMNLCGHATVASLYALIEKGRLQADQTYQIET    100

BSNT_01410___    101 KAGILPVKISEKDGRIHITLEQASPQFKPFTGDRKKLADALGITDEDFHE    150
                     ||||||.|.:|::||::||||||.|||.|||||::|||.:||||.||||.
RBAM_008540__    101 KAGILPAKAAERNGRVYITLEQAPPQFLPFTGDKEKLAASLGITAEDFHS    150

BSNT_01410___    151 DLPIVFGSTGIWTAIVPLKSLEASKKMVPDNKQFPEVLVDLPKASVHPFT    200
                     .||||:|||||||.||||:||:||:.|||||.|||.:|.||||||||||:
RBAM_008540__    151 GLPIVYGSTGIWTLIVPLRSLKASRNMVPDNAQFPAILRDLPKASVHPFS    200

BSNT_01410___    201 FETVHPDSDLHGRHFSSPYSGTIEDPVTGTASGVMGAYMKHYGNAEQHKF    250
                     .|||||:|||||||||||:|||.||||||||||||.|||:.||.:|....
RBAM_008540__    201 RETVHPESDLHGRHFSSPFSGTTEDPVTGTASGVMAAYMRQYGGSEAECL    250

BSNT_01410___    251 IIEQGQEIGKDGKVEIEMNEAGGHVKVNMTGTAVYSETRILKF---    293
                     .|||||||||||||||.:.|..|.:.:.|||||||:||  :.|   
RBAM_008540__    251 TIEQGQEIGKDGKVEIRIAEENGEMNIKMTGTAVYAET--INFQLP    294


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