Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01401 and RBAM_008520

See DNA alignment / Visit BSNT_01401 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:06
# Commandline: needle
#    -asequence pep-align/BSNT_01401___yfiV.1.9828.seq
#    -bsequence pep-align/RBAM_008520___yfiV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01401___yfiV-RBAM_008520___yfiV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01401___yfiV-RBAM_008520___yfiV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01401___yfiV
# 2: RBAM_008520___yfiV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     130/160 (81.2%)
# Similarity:   147/160 (91.9%)
# Gaps:           0/160 ( 0.0%)
# Score: 658.0
# 
#
#=======================================

BSNT_01401___      1 MEYNLHDTTVLNENILSSEEREIWVLYMKVLTSAGLGDVSEWMKLDMSMP     50
                     |:|||||||||:.:|.|.|||:||||||||:|||||||||||||||||||
RBAM_008520__      1 MDYNLHDTTVLSGDIFSPEERDIWVLYMKVMTSAGLGDVSEWMKLDMSMP     50

BSNT_01401___     51 QMKVLMLLNNHGTLKVSDIAEKMGASLSNTTGLLDRLEKSGFVKRSHSEE    100
                     ||||||||||||||||||||||||||||||||||||||||.|:.|:.|||
RBAM_008520__     51 QMKVLMLLNNHGTLKVSDIAEKMGASLSNTTGLLDRLEKSCFITRAPSEE    100

BSNT_01401___    101 DRRSVVVQLTENAKKIFRGLYEKGHLKLKRSLELLSPEEKQAVSEGLSIL    150
                     ||||||||||||||.|||.||:|||:|||||||.|:.||||.|::||:||
RBAM_008520__    101 DRRSVVVQLTENAKDIFRSLYQKGHVKLKRSLETLTAEEKQTVNQGLAIL    150

BSNT_01401___    151 SRALEKAKKE    160
                     :|||:.:|:.
RBAM_008520__    151 ARALDSSKQG    160


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