Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01401 and RBAM_008520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence dna-align/BSNT_01401___yfiV.1.9828.seq
# -bsequence dna-align/RBAM_008520___yfiV.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01401___yfiV-RBAM_008520___yfiV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01401___yfiV-RBAM_008520___yfiV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01401___yfiV
# 2: RBAM_008520___yfiV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 499
# Identity: 371/499 (74.3%)
# Similarity: 371/499 (74.3%)
# Gaps: 32/499 ( 6.4%)
# Score: 1383.0
#
#
#=======================================
BSNT_01401___ 1 ATGGAATATAATTTACACGATACAACAGTATTAAACGAAAACATTCTTTC 50
|||||.||||||.|.||.||||||||||||||||.||...|.|||.||||
RBAM_008520__ 1 ATGGATTATAATCTGCATGATACAACAGTATTAAGCGGCGATATTTTTTC 50
BSNT_01401___ 51 ATCGGAGGAACGGGAAATATGGGTGCTCTATATGAAAGTCTTAACGTCCG 100
..|.|||||||||||.||.||||||||.||.||||||||..|.||.||.|
RBAM_008520__ 51 TCCTGAGGAACGGGATATTTGGGTGCTGTACATGAAAGTGATGACATCGG 100
BSNT_01401___ 101 CCGGCCTCGGTGATGTGTCCGAGTGGATGAAGCTGGATATGAGCATGCCG 150
|.||.||||||||||||||.||||||||||||||.|||||||||||||||
RBAM_008520__ 101 CGGGGCTCGGTGATGTGTCGGAGTGGATGAAGCTTGATATGAGCATGCCG 150
BSNT_01401___ 151 CAAATGAAAGTGCTGATGCTATTAAACAACCATGGAACATTGAAAGTGAG 200
||||||||||||||||||||..|.||||||||.||.||..|.||.|||||
RBAM_008520__ 151 CAAATGAAAGTGCTGATGCTTCTGAACAACCACGGGACGCTTAAGGTGAG 200
BSNT_01401___ 201 CGACATTGCTGAAAAAATGGGGGCTTCCCTGTCCAATACAACTGGGCTGC 250
.|||||.||.||.||||||||.||||||||.||.|||||.||.|||||||
RBAM_008520__ 201 TGACATAGCGGAGAAAATGGGCGCTTCCCTTTCAAATACGACGGGGCTGC 250
BSNT_01401___ 251 TTGACCGCCTTGAGAAATCAGGGTTTGTCAAACGCTCACATTCTGAAGAG 300
|||||||..|.||.||||||.|.||..|.|.||||.|.|..||.|||||.
RBAM_008520__ 251 TTGACCGTTTAGAAAAATCATGTTTCATTACACGCGCTCCGTCAGAAGAA 300
BSNT_01401___ 301 GACCGCCGCTCTGTAGTTGTTCAGTTGACAGAAAATGCGAAAAAGATTTT 350
||||||||.||.||.||.|||||.||.||.|||||.||||||.|.|||||
RBAM_008520__ 301 GACCGCCGTTCAGTCGTCGTTCAATTAACGGAAAACGCGAAAGATATTTT 350
BSNT_01401___ 351 CCGGGGTTTGTATGAAAAAGGCCACCTGAAATTGAAGCGTTCATTAGA-- 398
|||..|..|.|||.|||||||.||..|.|||||||||||||||||.||
RBAM_008520__ 351 CCGCAGCCTTTATCAAAAAGGACATGTAAAATTGAAGCGTTCATTGGAAA 400
BSNT_01401___ 399 -GCTG-CTGTCCCCTGAAGAAAAGCAGGCTGT--TTCCGAAGGGCTGTCT 444
|||| ||| ||||||||||.||..|.|| .|| |||||||..|.
RBAM_008520__ 401 CGCTGACTG----CTGAAGAAAAACAAACGGTCAATC--AAGGGCTTGCC 444
BSNT_01401___ 445 ATCCTTT--CAAGAGC--------ATTAGAAAAAGCGAAAAAAGAATAA 483
|| ||| ||||||| .||..|||.||.||.|.
RBAM_008520__ 445 AT--TTTGGCAAGAGCGCTTGATTCTTCCAAACAGGGATAG-------- 483
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