Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01395 and RBAM_008500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence pep-align/BSNT_01395___yfiT.1.9828.seq
# -bsequence pep-align/RBAM_008500___yfiT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01395___yfiT-RBAM_008500___yfiT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01395___yfiT-RBAM_008500___yfiT.aln
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#
# Aligned_sequences: 2
# 1: BSNT_01395___yfiT
# 2: RBAM_008500___yfiT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity: 125/180 (69.4%)
# Similarity: 140/180 (77.8%)
# Gaps: 2/180 ( 1.1%)
# Score: 678.0
#
#
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BSNT_01395___ 1 MTSVNLSYPIGEYKPRESISKEQKDKWIQVLEEVPAKLKQAVEGMTDSQL 50
|....||||||||:|.||||..||.:||..||..||||||||..|:||||
RBAM_008500__ 1 MEKQILSYPIGEYQPAESISAGQKQEWINTLEHAPAKLKQAVRAMSDSQL 50
BSNT_01395___ 51 DTPYRDGGWTVRQVIHHLADSHMNSYIRFKLSLTEETPAIRPYDEKAWSE 100
|||||:||||||||:|||||||||.|.||||||||..|.|||||||.|::
RBAM_008500__ 51 DTPYREGGWTVRQVVHHLADSHMNGYTRFKLSLTENEPEIRPYDEKGWAD 100
BSNT_01395___ 101 LKDSKTADPSGSLSLLQELHGRWTALLRTLTDQQFKRGFYHPDTKEIITL 150
|.|||||....:|.||..||.||.||||::|:.||||.::||.:||.:||
RBAM_008500__ 101 LHDSKTAACGDALELLAILHRRWAALLRSMTEDQFKRTYFHPVSKETVTL 150
BSNT_01395___ 151 ENTLGLYVWHSHHHIAHITELSRRMGWS-- 178
|..||||||||.|||||||||||||||.
RBAM_008500__ 151 EQALGLYVWHSEHHIAHITELSRRMGWHLS 180
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