Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01389 and RBAM_008450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence pep-align/BSNT_01389___padR.1.9828.seq
# -bsequence pep-align/RBAM_008450___padR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01389___padR-RBAM_008450___padR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01389___padR-RBAM_008450___padR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01389___padR
# 2: RBAM_008450___padR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 183
# Identity: 148/183 (80.9%)
# Similarity: 165/183 (90.2%)
# Gaps: 1/183 ( 0.5%)
# Score: 759.0
#
#
#=======================================
BSNT_01389___ 1 MRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTD 50
||:|||||||||||||||||||:||||||||||||||||||||||||||.
RBAM_008450__ 1 MRILKYAILGLLRKGELSGYDISSYFKEELGQFWSAKHSQIYPELKKLTA 50
BSNT_01389___ 51 EGFITFRTTIQGTKLEKKMYTLTDNGKQELHAWLIRHQPIPETVKDEFML 100
||||||||.|||||||||||||||.|:.||.|||.:..||||||||||||
RBAM_008450__ 51 EGFITFRTAIQGTKLEKKMYTLTDKGELELAAWLTKKDPIPETVKDEFML 100
BSNT_01389___ 101 KAYFISSLSRQEASDLFTDQLQKRKAKLSDLQESYEKLM-ASAKPMSFSS 149
||||||:|:::||.:||||||.|||.|||||:.||::|| :||:..||||
RBAM_008450__ 101 KAYFISALTQEEADELFTDQLVKRKEKLSDLENSYQELMTSSAEADSFSS 150
BSNT_01389___ 150 PDFGHYLVLTKALEREKNYVSWLESILAMIDKD 182
||||||||||||||||:||:||||.|||:|.|.
RBAM_008450__ 151 PDFGHYLVLTKALERERNYISWLEDILALIKKA 183
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