Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02052 and RBAM_008440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence pep-align/BSNT_02052___ctaO.1.9828.seq
# -bsequence pep-align/RBAM_008440___ctaO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02052___ctaO-RBAM_008440___ctaO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02052___ctaO-RBAM_008440___ctaO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02052___ctaO
# 2: RBAM_008440___ctaO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity: 195/321 (60.7%)
# Similarity: 242/321 (75.4%)
# Gaps: 7/321 ( 2.2%)
# Score: 1032.0
#
#
#=======================================
BSNT_02052___ 1 MENTRDSAAISETKYIKASHRVTIYDFIKLAKPGIIISNSIAAFGGFWIA 50
...:||.:|.......:|:|:.|||.|||||||||||:||.||||||
RBAM_008440__ 1 ---MNSNAAQTEQPMKHNGNRMTVKDFIILAKPGIIISNSLAALGGFWIA 47
BSNT_02052___ 51 FASAEKTLTGLAFLMTMVTAMLGTAFVMASGTVYNNYFDRHMDAKMARTR 100
:..:|:|..|......|..||:|||.||||.||:||:|||.|||||||||
RBAM_008440__ 48 WIQSERTGGGPGIFAAMAVAMIGTALVMASSTVFNNFFDRGMDAKMARTR 97
BSNT_02052___ 101 SRASVTGKMPPAMILTYGSVLGIAGLAMLYSLNPLTAYLGLAAFIFYAII 150
:|||||||:||.:::.||:.||..|..||.|||.|||.|||.||:.||::
RBAM_008440__ 98 TRASVTGKIPPPVMILYGTCLGACGFIMLASLNVLTAVLGLLAFLLYAVV 147
BSNT_02052___ 151 YTVWVKRTSVWSTFVGSFPGAAPPLMGYCAVTGDFSMTAVLLYTIMFLWQ 200
||:|.||.||.||||||||||||||:||||:||...|.|:|||.||||||
RBAM_008440__ 148 YTLWFKRHSVLSTFVGSFPGAAPPLIGYCALTGYIDMPAILLYAIMFLWQ 197
BSNT_02052___ 201 PPHFWAIGIRRKEEYRAAGVPLLPVVKGNHVTKIKMMQYIAVLVPVTLLF 250
|||||||||||||||||||:||||::|||..|||||::|.|||..|:||.
RBAM_008440__ 198 PPHFWAIGIRRKEEYRAAGIPLLPIIKGNRATKIKMLRYTAVLTAVSLLV 247
BSNT_02052___ 251 PFSLGTGHISPFYFLAALVLGGIWIKKSIKGFKTDDDVKWAKDMFVYSLI 300
|..: .:||||..:||:||.||:.:|:|||:..||.:|:|.||.||::
RBAM_008440__ 248 PLYI---DVSPFYTASALLLGAIWLYRSVKGFQAADDTQWSKGMFFYSIV 294
BSNT_02052___ 301 YFCLLFFIMMIDSFMMFLIR- 320
||.|||.|:|.|||:..::|
RBAM_008440__ 295 YFSLLFLILMADSFINAVLRT 315
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