Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01369 and RBAM_008430

See DNA alignment / Visit BSNT_01369 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:05
# Commandline: needle
#    -asequence pep-align/BSNT_01369___yfiE.1.9828.seq
#    -bsequence pep-align/RBAM_008430___yfiE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01369___yfiE-RBAM_008430___yfiE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01369___yfiE-RBAM_008430___yfiE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01369___yfiE
# 2: RBAM_008430___yfiE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     221/285 (77.5%)
# Similarity:   248/285 (87.0%)
# Gaps:           0/285 ( 0.0%)
# Score: 1177.0
# 
#
#=======================================

BSNT_01369___      1 MTSIHEDTHIGYAKLTIRSLERSLQFYCNVIGFQVLKKTDRQAELTADGK     50
                     ||.||:||.|||.||||:::||||.||.||||.||:.:|||.|.|:||||
RBAM_008430__      1 MTGIHQDTAIGYVKLTIKNMERSLGFYRNVIGLQVISQTDRSARLSADGK     50

BSNT_01369___     51 RVLLILEENPSAVVLPERSVTGLYHFAILLPDRKELGIALARLIEHGIAI    100
                     ||||:|||||.||||||||||||||||||||||||||||||||||:|||:
RBAM_008430__     51 RVLLVLEENPGAVVLPERSVTGLYHFAILLPDRKELGIALARLIENGIAL    100

BSNT_01369___    101 GHGDHAVSEALYLSDPDGNGIEMYADRPRSTWQRDREGNYVMTTTAVDIE    150
                     |.||||||||||||||||||||:|||||||||:||.||||||.|..||::
RBAM_008430__    101 GQGDHAVSEALYLSDPDGNGIEIYADRPRSTWRRDAEGNYVMQTAPVDVD    150

BSNT_01369___    151 GLLEEAGDERKTSLPNDTIIGHIHLHISDLKEAKAFYTDVLGFDIVGNYA    200
                     |||||||.|||:.||..|:|||||||::||:||||||||:||||||||||
RBAM_008430__    151 GLLEEAGAERKSRLPEGTVIGHIHLHVTDLQEAKAFYTDILGFDIVGNYA    200

BSNT_01369___    201 GMSALFVSAGGYHHHIGLNIWAGRNAPPKPTNASGLDYYTVVLPHQEELD    250
                     |||||||||||||||||||||||::|||||.|||||||||:.||||:||.
RBAM_008430__    201 GMSALFVSAGGYHHHIGLNIWAGKHAPPKPGNASGLDYYTIALPHQKELS    250

BSNT_01369___    251 LVANRVKHAGYSIEETENSFRVKDPVSGAYITFVI    285
                     .|...:..||:.|||.|....||||||||.|.|.:
RBAM_008430__    251 RVTKALTDAGFEIEEKEEGVFVKDPVSGADIAFTL    285


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