Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01367 and RBAM_008410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:04
# Commandline: needle
# -asequence pep-align/BSNT_01367___yfiC.1.9828.seq
# -bsequence pep-align/RBAM_008410___yfiC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01367___yfiC-RBAM_008410___yfiC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01367___yfiC-RBAM_008410___yfiC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01367___yfiC
# 2: RBAM_008410___yfiC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 605
# Identity: 509/605 (84.1%)
# Similarity: 558/605 (92.2%)
# Gaps: 1/605 ( 0.2%)
# Score: 2618.0
#
#
#=======================================
BSNT_01367___ 1 MLKDIRKPFQYPKLPIDKKEGAKKRAKAKDTKGTLRRIWSYLAERKGLLV 50
|.|||||||:|||:|:...||.:||||||||||||||||||:||:||||.
RBAM_008410__ 1 MQKDIRKPFRYPKIPLKSNEGGRKRAKAKDTKGTLRRIWSYVAEKKGLLT 50
BSNT_01367___ 51 LVMLMVVISAIFGLLGPFVIGKAIDHFIVGKTVSGLIPVLLLLLAIYIIQ 100
||::||||||||||||||||||||||||||:|..||..||.:|..||::|
RBAM_008410__ 51 LVIIMVVISAIFGLLGPFVIGKAIDHFIVGQTTDGLAGVLFILFGIYLVQ 100
BSNT_01367___ 101 SLSLWFQNYWMITISQGTVFRMRSELFTHLHELPIPFFDKQRHGELMSRV 150
||||||||||||.|||.|||:|||||||||||||||||||||.|:|||||
RBAM_008410__ 101 SLSLWFQNYWMINISQSTVFKMRSELFTHLHELPIPFFDKQRLGDLMSRV 150
BSNT_01367___ 151 TNDIENVSSTLNTSVIQILSSVITFAGTIAVMLYMSPLLTLITLTIIPVM 200
|||||||||||||||||:|||||||.|||:||||||||||||||.|||:|
RBAM_008410__ 151 TNDIENVSSTLNTSVIQVLSSVITFVGTISVMLYMSPLLTLITLLIIPIM 200
BSNT_01367___ 201 AASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIKAYSREKQITA 250
..|:||||||||.|||:||||||:|||:||||:||||||||||||.::..
RBAM_008410__ 201 LLSIKWITNRTGLLFKQQQKNLGELNGFIEESISGAKVIKAYSREDRVME 250
BSNT_01367___ 251 EFLEKNAALKTSGFWAQTISGFIPKVMNSLNNLSFTMIAAIGGLFALKGW 300
:||||||||::|||||||||||||||||||||||||:|||:|||||||||
RBAM_008410__ 251 QFLEKNAALQSSGFWAQTISGFIPKVMNSLNNLSFTIIAAVGGLFALKGW 300
BSNT_01367___ 301 ISIGSIVVFAEYSRQFTRPLNDLANQFNTMLSAIAGAERVFAVLDEKEER 350
|||||||||||||||||||||||||||||||||||||||||.||||||||
RBAM_008410__ 301 ISIGSIVVFAEYSRQFTRPLNDLANQFNTMLSAIAGAERVFDVLDEKEER 350
BSNT_01367___ 351 DDEKNAVHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPAGQSIAFVGP 400
:||::|::|||:||.||||||||||.:....||||.|:||.|||||||||
RBAM_008410__ 351 EDEEHALYQPIKTGEIEFRDVSFGYQEDSLILKHLSFSVPKGQSIAFVGP 400
BSNT_01367___ 401 TGAGKTTVTNLLARFYEPDEGKILIDGTDIKTLTRASLRKNMGFVLQDSF 450
|||||||||:|:||||||:.|||||||||||.|||:||||||||||||||
RBAM_008410__ 401 TGAGKTTVTSLIARFYEPNNGKILIDGTDIKKLTRSSLRKNMGFVLQDSF 450
BSNT_01367___ 451 LFQGTIRENIRYGRLDASDQEVEAAAKTANAHSFIERLPKGYDTVLTQNG 500
|||||||||||||||||||:|||||||.||||.|||||||||||||||||
RBAM_008410__ 451 LFQGTIRENIRYGRLDASDKEVEAAAKAANAHGFIERLPKGYDTVLTQNG 500
BSNT_01367___ 501 SGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLME 550
:||||||||||||||||||||||||||||||||||||||.|||||.|||.
RBAM_008410__ 501 AGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVKIQEALGRLMA 550
BSNT_01367___ 551 GRTSVIIAHRLNTIQRADQIVVLKDGEMIEKGSHDELIQQKGFYSDLYES 600
|||||||||||||||:||||:|||||||.|||:|.||:.|.|||.:||||
RBAM_008410__ 551 GRTSVIIAHRLNTIQKADQILVLKDGEMAEKGTHAELLSQNGFYRELYES 600
BSNT_01367___ 601 QFEK- 604
||.:
RBAM_008410__ 601 QFRES 605
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