Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01367 and RBAM_008410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:04
# Commandline: needle
# -asequence dna-align/BSNT_01367___yfiC.1.9828.seq
# -bsequence dna-align/RBAM_008410___yfiC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01367___yfiC-RBAM_008410___yfiC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01367___yfiC-RBAM_008410___yfiC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01367___yfiC
# 2: RBAM_008410___yfiC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1859
# Identity: 1424/1859 (76.6%)
# Similarity: 1424/1859 (76.6%)
# Gaps: 85/1859 ( 4.6%)
# Score: 5345.0
#
#
#=======================================
BSNT_01367___ 1 ATGCTAAAAGACATCCGCAAGCCTTTCCAATATCCCAAACTGCCAATTGA 50
||||.|||||||||.||.||.|||||||.||||||.|||.|.||..|
RBAM_008410__ 1 ATGCAAAAAGACATTCGTAAACCTTTCCGATATCCGAAAATACCGCT--- 47
BSNT_01367___ 51 CAA---AAAAGAAGGAGCGAAAAAGCGGGCGAAAGCAAAGGATACAAAGG 97
||| |||.|||||.|..|.|||.||.|||||||||||.||||||||.|
RBAM_008410__ 48 CAAATCAAATGAAGGCGGCAGAAAACGCGCGAAAGCAAAAGATACAAAAG 97
BSNT_01367___ 98 GCACACTGAGACGAATCTGGTCTTACTTGGCTGAAAGAAAAGGACTGCTC 147
||||.|||.|..|||||||||||||..|.||.||.|.|||||| |||.
RBAM_008410__ 98 GCACGCTGCGCAGAATCTGGTCTTATGTAGCCGAGAAAAAAGG---GCTT 144
BSNT_01367___ 148 GTA---CTTGTCATGCTGATGGTTGTCATCAGCGCGATATTCGGGCTCCT 194
.|| |||||.||..|.|||||.|||||.|||||.||||||||.||.||
RBAM_008410__ 145 TTAACCCTTGTGATCATCATGGTAGTCATAAGCGCCATATTCGGCCTGCT 194
BSNT_01367___ 195 TGGCCCCTTTGTGATCGGAAAGGCCATTGACCATTTTATCGTCGGGAAAA 244
.||.||.||.||.|||||.||.||.|||||.||||||||||||||..|.|
RBAM_008410__ 195 CGGACCGTTCGTCATCGGGAAAGCGATTGATCATTTTATCGTCGGACAGA 244
BSNT_01367___ 245 CGGTCAG-CGGCTTGATTCCCGTTTTGC--TTC-TTCTGCTCGCTATCTA 290
| |.||| |||.||| .|.|...||| ||| |.|||.|.|..||.||
RBAM_008410__ 245 C-GACAGACGGATTG---GCGGGGGTGCTGTTCATCCTGTTTGGGATTTA 290
BSNT_01367___ 291 TATCATTCAGTCCCTGTCGCTT-TGGTTTCAAAACTATTGGATGATTACG 339
..||.|.||.||..|||| ||| |||||||||||||||||||||||.|..
RBAM_008410__ 291 CCTCGTGCAATCATTGTC-CTTATGGTTTCAAAACTATTGGATGATCAAT 339
BSNT_01367___ 340 ATCTCGCAGGGCACGGTTTTCAGAATGAGAAGCGAATTGTTCACCCATCT 389
||||||||..||||.||.||.|.||||.|.|||||..||||.||||||||
RBAM_008410__ 340 ATCTCGCAAAGCACCGTGTTTAAAATGCGGAGCGAGCTGTTTACCCATCT 389
BSNT_01367___ 390 GCATGAGCTGCCGATTCCATTTTTTGATAAACAGCGGCACGGCGAGCTGA 439
||||||||||||||||||.|||||||||||||||||||.|||.||..|.|
RBAM_008410__ 390 GCATGAGCTGCCGATTCCGTTTTTTGATAAACAGCGGCTCGGGGACTTAA 439
BSNT_01367___ 440 TGAGCCGGGTGACGAATGACATCGAAAATGTCAGTTCTACCTTAAACACG 489
||||||||||.||.|||||.||||||||||||||.||.||.|||||.||.
RBAM_008410__ 440 TGAGCCGGGTCACCAATGATATCGAAAATGTCAGCTCCACTTTAAATACA 489
BSNT_01367___ 490 TCAGTCATTCAAATTTTGTCAAGCGTGATCACCTTTGCCGGGACGATTGC 539
||.|||||||||.|..||||.|||||.||.||.||.|.|||.||.||..|
RBAM_008410__ 490 TCCGTCATTCAAGTGCTGTCGAGCGTCATTACATTCGTCGGCACAATCTC 539
BSNT_01367___ 540 GGTGATGCTGTACATGAGCCCGCTCCTTACATTGATTACGCTGACCATTA 589
.||.||||||||||||||.|||||..|.||||||||.|||||....||||
RBAM_008410__ 540 CGTCATGCTGTACATGAGTCCGCTTTTAACATTGATCACGCTTTTGATTA 589
BSNT_01367___ 590 TTCCGGTGATGGCAGC----GAGCCTGAAATGGATCACCAACCGAACGGG 635
|||||.|.|| || ||||.|.|||||||||||||||||.|||||
RBAM_008410__ 590 TTCCGATCAT----GCTTTTGAGCATTAAATGGATCACCAACCGGACGGG 635
BSNT_01367___ 636 AAAGCTGTTTAAAGAACAGCAGAAAAACCTAGGTGATCTGAATGGGTATA 685
|..|||||||||..|.||||||||||||||.||.||.|||||.||.|.||
RBAM_008410__ 636 ATTGCTGTTTAAGCAGCAGCAGAAAAACCTCGGCGAGCTGAACGGTTTTA 685
BSNT_01367___ 686 TTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAAGCATATTCACGTGAG 735
||||.||.||..|.|||||.||.||||||||.|||||.|||| ||.|.|
RBAM_008410__ 686 TTGAAGAGTCGATATCAGGGGCGAAGGTCATTAAAGCCTATT--CGAGGG 733
BSNT_01367___ 736 AAGCAGATTACTGC----TG----AATTTCTCGAAAAAAACGC-----TG 772
||| ||.|| || |||||.|.||||||||||| |.
RBAM_008410__ 734 AAG------ACCGCGTCATGGAACAATTTTTAGAAAAAAACGCGGCGTTA 777
BSNT_01367___ 773 CACTCAAGACGTCGGGCTTTTGGGCGCAGACGATTTCCGGGTTTATCCCG 822
||.||| |||||.||||||||||||||||||||.||.||.||.|||
RBAM_008410__ 778 CAATCA-----TCGGGGTTTTGGGCGCAGACGATTTCGGGATTCATTCCG 822
BSNT_01367___ 823 AAGGTCATGAACTCTTTGAATAACTTAAGCTTTACAATGATTGCGGCAAT 872
||.||||||||||||||.||.||.|||||||||||.||.||.|||||..|
RBAM_008410__ 823 AAAGTCATGAACTCTTTAAACAATTTAAGCTTTACGATTATAGCGGCGGT 872
BSNT_01367___ 873 CGGCGGTTTGTTTGCGCTGAAAGGCTGGATCTCGATCGGCTCCATCGTCG 922
||||||..|||||||||||||.||.||||||||||||||.||||||||||
RBAM_008410__ 873 CGGCGGGCTGTTTGCGCTGAAGGGGTGGATCTCGATCGGTTCCATCGTCG 922
BSNT_01367___ 923 TCTTTGCCGAGTATTCAAGACAATTTACACGCCCTTTAAACGATCTGGCC 972
|.||.|||||.|||||..|.||.||.||.|||||||||||.|||.|.|||
RBAM_008410__ 923 TATTCGCCGAATATTCGCGGCAGTTCACGCGCCCTTTAAATGATTTAGCC 972
BSNT_01367___ 973 AACCAGTTTAATACGATGCTGTCCGCAATTGCCGGCGCTGAACGGGTGTT 1022
||.|||||.|||||||||.|.||.||.||.|||||.||||||||||||||
RBAM_008410__ 973 AATCAGTTCAATACGATGTTATCGGCCATCGCCGGGGCTGAACGGGTGTT 1022
BSNT_01367___ 1023 TGCCGTGCTTGATGAAAAAGAAGAGCGCGATGATGAAAAGAACGCCGTGC 1072
||.||||||.|||||||||||.|||||.||.||||||.||.|.||..||.
RBAM_008410__ 1023 TGACGTGCTGGATGAAAAAGAGGAGCGGGAAGATGAAGAGCATGCGCTGT 1072
BSNT_01367___ 1073 ATCAGCCCATCCAAACAGGCAG-CATTGAATTCAGGGATGTTTCCTTCGG 1121
|.|||||.|||.|||| ||.|| .|||||||||.|.|||||.||||||||
RBAM_008410__ 1073 ACCAGCCGATCAAAAC-GGGAGAGATTGAATTCCGAGATGTCTCCTTCGG 1121
BSNT_01367___ 1122 TTACGATAAAGGGCAGCAGACACTG------AAGCA--TTTACAGTTCAC 1163
.||..|..|| |.|||| ||| ||.|| |.|.| ||||.
RBAM_008410__ 1122 CTATCAGGAA-GACAGC-----CTGATCTTAAAACACCTGTCC--TTCAG 1163
BSNT_01367___ 1164 CGTGCCTGCGGGGCAGTCCATCGCGTTTGTCGGACCGACGGGGGCGGGGA 1213
|||.||....||.|||||.|||||.||.|||||||||||.||.|||||.|
RBAM_008410__ 1164 CGTTCCGAAAGGACAGTCAATCGCCTTCGTCGGACCGACCGGAGCGGGTA 1213
BSNT_01367___ 1214 AGACAACCGTCACTAACCTTCTCGCCCGTTTTTACGAGCCTGACGAA-GG 1262
|.||||||||.||.|.|||..||||||||||||||||||| ||..|| ||
RBAM_008410__ 1214 AAACAACCGTTACGAGCCTGATCGCCCGTTTTTACGAGCC-GAATAACGG 1262
BSNT_01367___ 1263 AAAAATTTTAATCGACGGTACAGATATTAAAACCCTTACTAGAGCAAGCC 1312
||||||..|.||.|||||.||.|||||.||||..||.||.|||.|.||.|
RBAM_008410__ 1263 AAAAATCCTCATTGACGGAACGGATATCAAAAAACTGACGAGATCCAGTC 1312
BSNT_01367___ 1313 TGAGAAAAAACATGGGGTTTGTTCTTCAGGATT-CTTTCTTATTTCAGGG 1361
||||||||||||||||||||||.||.||||||| ||||| |.||||||||
RBAM_008410__ 1313 TGAGAAAAAACATGGGGTTTGTCCTGCAGGATTCCTTTC-TCTTTCAGGG 1361
BSNT_01367___ 1362 AACGATCAGAGAAAACATTCGCTACGGCAGGCTTGATGCTTCTGATCAGG 1411
.||.|||||.|||||.|||||.||||||.||||.|||||||||||..|.|
RBAM_008410__ 1362 CACCATCAGGGAAAATATTCGTTACGGCCGGCTGGATGCTTCTGACAAAG 1411
BSNT_01367___ 1412 AAGTCGAAGCCGCTGCAAAAACAGCGAATGCCCATAGTTTTATTGAAAGG 1461
|.||.||.||.||.||||||.|.||.||||||||..|.||.||.|||.||
RBAM_008410__ 1412 AGGTGGAGGCAGCCGCAAAAGCCGCCAATGCCCACGGATTCATCGAACGG 1461
BSNT_01367___ 1462 CTGCCAAAAGGGTATGACACCGTGCTGACGCAAAACGGTTCGGGCATCAG 1511
||.||.|||||.||.||.|||||.||.||.||||||||..||||||||||
RBAM_008410__ 1462 CTCCCGAAAGGCTACGATACCGTCCTTACCCAAAACGGCGCGGGCATCAG 1511
BSNT_01367___ 1512 TCAGGGACAGAAGCAGTTGATTTCTATAGCGAGGGCGGTGCTTGCCGATC 1561
.||.|||||.||.|||.|.|||||.||.|||||.||.|||||.||.||.|
RBAM_008410__ 1512 CCAAGGACAAAAACAGCTCATTTCCATCGCGAGAGCTGTGCTGGCGGACC 1561
BSNT_01367___ 1562 CGGTTCTTCTCATTTTGGATGAAGCGACAAGCAACATTGATACCGTTACA 1611
|.||.||.||||||||||||||||||||.||||||||||||||.||.||.
RBAM_008410__ 1562 CTGTGCTGCTCATTTTGGATGAAGCGACGAGCAACATTGATACGGTGACG 1611
BSNT_01367___ 1612 GAAGTCAACATTCAAGAAGCGCTTGCCCGTTTAATGGAAGGAAGAACAAG 1661
|||||.||.||.|||||||||||.|.|||||||||||..||.||||||||
RBAM_008410__ 1612 GAAGTGAAAATACAAGAAGCGCTCGGCCGTTTAATGGCGGGCAGAACAAG 1661
BSNT_01367___ 1662 CGTCATCATTGCCCACAGGCTGAACACCATTCAAAGAGCGGACCAGATTG 1711
|||||||||.||.||||||||||||||.|||||||.|||.||.||||||.
RBAM_008410__ 1662 CGTCATCATCGCTCACAGGCTGAACACAATTCAAAAAGCCGATCAGATTC 1711
BSNT_01367___ 1712 TGGTGCTAAAAGACGGTGAAATGATTGAAAAAGGCAGCCATGACGAGCTG 1761
|.|||.|.||||||||.||||||..|||||||||.|.|||||.|||.||
RBAM_008410__ 1712 TTGTGTTGAAAGACGGCGAAATGGCTGAAAAAGGAACCCATGCCGAACT- 1760
BSNT_01367___ 1762 AT-TCAG-CAAAAAGGATTTTACAGTGACTTATATGAAAGCCAATT-TGA 1808
| |||| ||.||.||.||||||.|.||.||||||||||||||.|| .|.
RBAM_008410__ 1761 -TCTCAGCCAGAACGGGTTTTACCGGGAATTATATGAAAGCCAGTTCCGG 1809
BSNT_01367___ 1809 GAA--ATAG 1815
||| ||||
RBAM_008410__ 1810 GAATCATAG 1818
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