Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01351 and RBAM_008340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:03
# Commandline: needle
# -asequence pep-align/BSNT_01351___acoR.1.9828.seq
# -bsequence pep-align/RBAM_008340___acoR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01351___acoR-RBAM_008340___acoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01351___acoR-RBAM_008340___acoR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01351___acoR
# 2: RBAM_008340___acoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 606
# Identity: 388/606 (64.0%)
# Similarity: 481/606 (79.4%)
# Gaps: 5/606 ( 0.8%)
# Score: 2034.5
#
#
#=======================================
BSNT_01351___ 1 MNSVPNDLQTWKRFVKDGVLDEARLRKRIAESWHRCKKAEVNPYLEKGPK 50
||.:.||.:|||||||:|||||:|::||:|.||||||||:|||||||||.
RBAM_008340__ 1 MNVIRNDFKTWKRFVKEGVLDESRIQKRVAASWHRCKKADVNPYLEKGPN 50
BSNT_01351___ 51 VLQQTELDQQSKKHSFFLTTAKPYLEKLLPAIKEMEMMALLIDSDGVVLA 100
|:....|::|::||:.||..:.|:.|::..|::|||||.|||||||||.:
RBAM_008340__ 51 VMPADHLERQAEKHALFLAASTPHAERMKTAMREMEMMVLLIDSDGVVHS 100
BSNT_01351___ 101 LDGHSRALYEAKRINFVEGACWTETAVGTNAIGTALHISEPVAIQGSEHY 150
:|||.|.::||.||||::||.|||||||||||||||:.:|||.|.|||||
RBAM_008340__ 101 VDGHPRTIHEANRINFLKGARWTETAVGTNAIGTALYTNEPVMIHGSEHY 150
BSNT_01351___ 151 SIASHLWNCSAAPIHHEDGSLAGVIDISCPAAGAHPHMLGIATAIAYAAE 200
|:|||.|:||||||.:|||.||||||||||||.|.|.|||||::|||.||
RBAM_008340__ 151 SLASHQWSCSAAPIRYEDGRLAGVIDISCPAARAQPFMLGIASSIAYTAE 200
BSNT_01351___ 201 RELAAKSREKELELISRFGERAASSVPMVLCNTKQHIISASIPIRTSIPD 250
||||.|.:..||::||:|.....|..|:||||....:|:||.|:: .
RBAM_008340__ 201 RELALKIKMTELDMISKFAGLTRSHDPIVLCNEMSRVIAASRPVQ----H 246
BSNT_01351___ 251 WQGRHLYELKERGYSIEKAVTIGDGGTCFYLSEQKKKKVFRFNGVIGQSG 300
:.|..|.||:|:|:.|::|....:|.||.|||::::|..|.|:|..|:|.
RBAM_008340__ 247 FTGHTLRELEEQGFHIKQAKREENGYTCVYLSKREEKPAFIFHGAAGKSP 296
BSNT_01351___ 301 RSQAMLMNLERAAAADATVCLSGETGTGKEVAARALHENSERRHGPFIAV 350
.|:.||..||..|..||||||:|||||||||||||:|.||.|::||||||
RBAM_008340__ 297 SSRHMLQQLELVARTDATVCLTGETGTGKEVAARAIHNNSSRKNGPFIAV 346
BSNT_01351___ 351 NCGAIPSDLIESELFGYAEGAFTGAKRNGYKGAFQKANQGTLFLDEIGEI 400
||||:|..|||||||||:|||||||||.|:.||.|||::|||||||||||
RBAM_008340__ 347 NCGAVPEKLIESELFGYSEGAFTGAKRKGHNGALQKADKGTLFLDEIGEI 396
BSNT_01351___ 401 SHSMQVALLRVLQERKITPIGGTKEIPVDIRVIAATHCDLRELAENGKIR 450
||||||||||||||||:||:|||||||||||:|.|||.|||:|.|..|:|
RBAM_008340__ 397 SHSMQVALLRVLQERKVTPVGGTKEIPVDIRIITATHTDLRQLVECKKLR 446
BSNT_01351___ 451 EDLFYRLHVYPIELPPLRDRTEDIPDLFEHYKQKNHWPGELPSDFCNVLK 500
|||||||||.||.|||||:||||||.||..:::...|.||||.||.::||
RBAM_008340__ 447 EDLFYRLHVCPIHLPPLRERTEDIPGLFLEFQRNRGWRGELPDDFLDLLK 496
BSNT_01351___ 501 QWKWPGNIRELFNVFERLSIRFPDGRLRDEPLPALLEAAGLPASSAEKKP 550
..|||||||||||||||||:.||||||.:.|:.|||||:||..::...:.
RBAM_008340__ 497 SRKWPGNIRELFNVFERLSVMFPDGRLSERPIAALLEASGLKEAAESYEQ 546
BSNT_01351___ 551 AAAGVLTFREQIQKDMMIKALESAKGNVSQAAKISGIPRSTFYKRLKKFN 600
..|..::.||.|||::::.|||||||||:.|||::||||||||||||||.
RBAM_008340__ 547 EEASPVSIREHIQKNIIVNALESAKGNVTLAAKMAGIPRSTFYKRLKKFK 596
BSNT_01351___ 601 LSAES- 605
|:|..
RBAM_008340__ 597 LTAGQL 602
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