Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01351 and RBAM_008340

See DNA alignment / Visit BSNT_01351 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence pep-align/BSNT_01351___acoR.1.9828.seq
#    -bsequence pep-align/RBAM_008340___acoR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01351___acoR-RBAM_008340___acoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01351___acoR-RBAM_008340___acoR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01351___acoR
# 2: RBAM_008340___acoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 606
# Identity:     388/606 (64.0%)
# Similarity:   481/606 (79.4%)
# Gaps:           5/606 ( 0.8%)
# Score: 2034.5
# 
#
#=======================================

BSNT_01351___      1 MNSVPNDLQTWKRFVKDGVLDEARLRKRIAESWHRCKKAEVNPYLEKGPK     50
                     ||.:.||.:|||||||:|||||:|::||:|.||||||||:|||||||||.
RBAM_008340__      1 MNVIRNDFKTWKRFVKEGVLDESRIQKRVAASWHRCKKADVNPYLEKGPN     50

BSNT_01351___     51 VLQQTELDQQSKKHSFFLTTAKPYLEKLLPAIKEMEMMALLIDSDGVVLA    100
                     |:....|::|::||:.||..:.|:.|::..|::|||||.|||||||||.:
RBAM_008340__     51 VMPADHLERQAEKHALFLAASTPHAERMKTAMREMEMMVLLIDSDGVVHS    100

BSNT_01351___    101 LDGHSRALYEAKRINFVEGACWTETAVGTNAIGTALHISEPVAIQGSEHY    150
                     :|||.|.::||.||||::||.|||||||||||||||:.:|||.|.|||||
RBAM_008340__    101 VDGHPRTIHEANRINFLKGARWTETAVGTNAIGTALYTNEPVMIHGSEHY    150

BSNT_01351___    151 SIASHLWNCSAAPIHHEDGSLAGVIDISCPAAGAHPHMLGIATAIAYAAE    200
                     |:|||.|:||||||.:|||.||||||||||||.|.|.|||||::|||.||
RBAM_008340__    151 SLASHQWSCSAAPIRYEDGRLAGVIDISCPAARAQPFMLGIASSIAYTAE    200

BSNT_01351___    201 RELAAKSREKELELISRFGERAASSVPMVLCNTKQHIISASIPIRTSIPD    250
                     ||||.|.:..||::||:|.....|..|:||||....:|:||.|::    .
RBAM_008340__    201 RELALKIKMTELDMISKFAGLTRSHDPIVLCNEMSRVIAASRPVQ----H    246

BSNT_01351___    251 WQGRHLYELKERGYSIEKAVTIGDGGTCFYLSEQKKKKVFRFNGVIGQSG    300
                     :.|..|.||:|:|:.|::|....:|.||.|||::::|..|.|:|..|:|.
RBAM_008340__    247 FTGHTLRELEEQGFHIKQAKREENGYTCVYLSKREEKPAFIFHGAAGKSP    296

BSNT_01351___    301 RSQAMLMNLERAAAADATVCLSGETGTGKEVAARALHENSERRHGPFIAV    350
                     .|:.||..||..|..||||||:|||||||||||||:|.||.|::||||||
RBAM_008340__    297 SSRHMLQQLELVARTDATVCLTGETGTGKEVAARAIHNNSSRKNGPFIAV    346

BSNT_01351___    351 NCGAIPSDLIESELFGYAEGAFTGAKRNGYKGAFQKANQGTLFLDEIGEI    400
                     ||||:|..|||||||||:|||||||||.|:.||.|||::|||||||||||
RBAM_008340__    347 NCGAVPEKLIESELFGYSEGAFTGAKRKGHNGALQKADKGTLFLDEIGEI    396

BSNT_01351___    401 SHSMQVALLRVLQERKITPIGGTKEIPVDIRVIAATHCDLRELAENGKIR    450
                     ||||||||||||||||:||:|||||||||||:|.|||.|||:|.|..|:|
RBAM_008340__    397 SHSMQVALLRVLQERKVTPVGGTKEIPVDIRIITATHTDLRQLVECKKLR    446

BSNT_01351___    451 EDLFYRLHVYPIELPPLRDRTEDIPDLFEHYKQKNHWPGELPSDFCNVLK    500
                     |||||||||.||.|||||:||||||.||..:::...|.||||.||.::||
RBAM_008340__    447 EDLFYRLHVCPIHLPPLRERTEDIPGLFLEFQRNRGWRGELPDDFLDLLK    496

BSNT_01351___    501 QWKWPGNIRELFNVFERLSIRFPDGRLRDEPLPALLEAAGLPASSAEKKP    550
                     ..|||||||||||||||||:.||||||.:.|:.|||||:||..::...:.
RBAM_008340__    497 SRKWPGNIRELFNVFERLSVMFPDGRLSERPIAALLEASGLKEAAESYEQ    546

BSNT_01351___    551 AAAGVLTFREQIQKDMMIKALESAKGNVSQAAKISGIPRSTFYKRLKKFN    600
                     ..|..::.||.|||::::.|||||||||:.|||::||||||||||||||.
RBAM_008340__    547 EEASPVSIREHIQKNIIVNALESAKGNVTLAAKMAGIPRSTFYKRLKKFK    596

BSNT_01351___    601 LSAES-    605
                     |:|.. 
RBAM_008340__    597 LTAGQL    602


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