Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01349 and RBAM_008330
See
DNA alignment /
Visit
BSNT_01349 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:03
# Commandline: needle
# -asequence pep-align/BSNT_01349___acoL.1.9828.seq
# -bsequence pep-align/RBAM_008330___acoL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01349___acoL-RBAM_008330___acoL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01349___acoL-RBAM_008330___acoL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01349___acoL
# 2: RBAM_008330___acoL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 460
# Identity: 332/460 (72.2%)
# Similarity: 398/460 (86.5%)
# Gaps: 3/460 ( 0.7%)
# Score: 1751.0
#
#
#=======================================
BSNT_01349___ 1 MTLAIIGGGPAGYAAAVSAAQQGRNVLLIDKGKLGGTCLNEGCIPTKSLL 50
|||||||||||||||||:||::|..|:|||||.|||||||||||||||||
RBAM_008330__ 1 MTLAIIGGGPAGYAAAVTAARRGEEVVLIDKGPLGGTCLNEGCIPTKSLL 50
BSNT_01349___ 51 ESANVLDKIKHADSFGIELPAGAISVDWSKMQSRKQQVVSQLVQGVQYLM 100
|||||||||:|||:||||||.. |:::|::||.||:|:|||||||:||||
RBAM_008330__ 51 ESANVLDKIRHADTFGIELPQN-ITLNWARMQGRKRQIVSQLVQGIQYLM 99
BSNT_01349___ 101 KKNQIQVVKGTASFLSERKLLIEGEKG-KEIREADQVLIASGSEPIELPF 149
|.|||:|:.||||||:|:.||:|||.| |:|.|||::||||||||.||||
RBAM_008330__ 100 KANQIKVISGTASFLTEQTLLVEGEGGAKDILEADRILIASGSEPAELPF 149
BSNT_01349___ 150 APFDGEWILDSKDALSLSEIPSSLVIVGGGVIGCEYAGLFARLGSKVTII 199
|||||:|::||||||||.:|||||:||||||||||:|.||:|..:|||:|
RBAM_008330__ 150 APFDGDWVIDSKDALSLQKIPSSLLIVGGGVIGCEFASLFSRFKTKVTVI 199
BSNT_01349___ 200 ETADQLIPAEDEDIARLFQEKLEEDGVEVHTSSRLERVDQTAKTAIWKSG 249
|:||:|:||||.:||.:|::.|.:.|.::.|.:.|:|:|:..|||:|...
RBAM_008330__ 200 ESADRLLPAEDGEIAAVFEDSLRDSGADIQTKAALQRIDKERKTAVWTKD 249
BSNT_01349___ 250 QREFKTKADYVLVAIGRKPRLDGLQLEQAGVDFSPKGIPVNGHMQTNVPH 299
.:|.:.:||:|||||||||||.||.|||||:.:||:||.||.||||||||
RBAM_008330__ 250 GKEIEAQADHVLVAIGRKPRLHGLNLEQAGIRYSPRGIEVNDHMQTNVPH 299
BSNT_01349___ 300 IYACGDAIGGIQLAHAAFHEGIIAASHASGRDVKINEKHVPRCIYTSPEI 349
|||||||.||:||||||.||||.||:||||:|.|:|...||||||||||:
RBAM_008330__ 300 IYACGDAAGGMQLAHAAIHEGITAAAHASGKDSKVNMHAVPRCIYTSPEM 349
BSNT_01349___ 350 ACIGMTERQARRIYGDVKIGEFPFSANGKALIKQQAEGKVKIMAEPEFGE 399
|.:|:||.|||..||||||||..||||||||||.|..||:||:|||||||
RBAM_008330__ 350 AAVGLTETQARETYGDVKIGECSFSANGKALIKHQHGGKMKIIAEPEFGE 399
BSNT_01349___ 400 IVGVSMIGPDVTELIGQAAAIMNGEMTADMAEHFIAAHPTLSETLHEALL 449
||||||||||||||||||..:|||||||||:||||||||||||||.||||
RBAM_008330__ 400 IVGVSMIGPDVTELIGQAVMMMNGEMTADMSEHFIAAHPTLSETLQEALL 449
BSNT_01349___ 450 STIGLAVHA- 458
:..|||||:
RBAM_008330__ 450 NVTGLAVHSV 459
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.