Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01342 and RBAM_008290

See DNA alignment / Visit BSNT_01342 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:02
# Commandline: needle
#    -asequence pep-align/BSNT_01342___yfjM.1.9828.seq
#    -bsequence pep-align/RBAM_008290___yfjM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01342___yfjM-RBAM_008290___yfjM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01342___yfjM-RBAM_008290___yfjM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01342___yfjM
# 2: RBAM_008290___yfjM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:     142/166 (85.5%)
# Similarity:   144/166 (86.7%)
# Gaps:          16/166 ( 9.6%)
# Score: 770.0
# 
#
#=======================================

BSNT_01342___      1 MKRLCIIPCGKKKIWDVQPDAGPVRAEDAYLSPFHQACERYAKAFFDEWV     50
                     |||||||||||||||||..|.|||||||||||||||||||||||||||||
RBAM_008290__      1 MKRLCIIPCGKKKIWDVHSDTGPVRAEDAYLSPFHQACERYAKAFFDEWV     50

BSNT_01342___     51 ILSAKHGFLRPDDLVSGNYDVTFGTGHPEIMTADELSRQFHEKGFSDIEE    100
                     |||||||||||||:|.|||||||||||||||.||||.|||||||||||||
RBAM_008290__     51 ILSAKHGFLRPDDMVPGNYDVTFGTGHPEIMAADELRRQFHEKGFSDIEE    100

BSNT_01342___    101 LVMLGGKKYRSVLNAVIGEHQHISWPLSSYKGIGYMLQALNRAVEEKHEL    150
                     |||||||||||||||||||||||:||||||||||||||||||||||||||
RBAM_008290__    101 LVMLGGKKYRSVLNAVIGEHQHITWPLSSYKGIGYMLQALNRAVEEKHEL    150

BSNT_01342___    150 ----------------    150
                                     
RBAM_008290__    151 QHVDMKKKSVTTQSPR    166


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