Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01342 and RBAM_008290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:02
# Commandline: needle
# -asequence dna-align/BSNT_01342___yfjM.1.9828.seq
# -bsequence dna-align/RBAM_008290___yfjM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01342___yfjM-RBAM_008290___yfjM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01342___yfjM-RBAM_008290___yfjM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01342___yfjM
# 2: RBAM_008290___yfjM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 501
# Identity: 403/501 (80.4%)
# Similarity: 403/501 (80.4%)
# Gaps: 48/501 ( 9.6%)
# Score: 1815.0
#
#
#=======================================
BSNT_01342___ 1 ATGAAACGGCTATGCATCATCCCCTGCGGCAAGAAAAAAATCTGGGACGT 50
||||||||.||.|||||||||||||||||||||||||||||.|||||.||
RBAM_008290__ 1 ATGAAACGACTGTGCATCATCCCCTGCGGCAAGAAAAAAATTTGGGATGT 50
BSNT_01342___ 51 CCAGCCTGATGCCGGGCCGGTAAGAGCAGAGGACGCTTATCTCAGCCCGT 100
|||..|.|||.|.||.||||||||.||.||.|||||||||||||||||||
RBAM_008290__ 51 CCATTCAGATACAGGTCCGGTAAGGGCGGAAGACGCTTATCTCAGCCCGT 100
BSNT_01342___ 101 TTCATCAGGCGTGCGAACGGTATGCGAAAGCATTTTTCGATGAGTGGGTG 150
||||||||||||||||.||.||||||||||||||||||||||||||||||
RBAM_008290__ 101 TTCATCAGGCGTGCGAGCGATATGCGAAAGCATTTTTCGATGAGTGGGTG 150
BSNT_01342___ 151 ATTTTGTCTGCGAAGCACGGGTTCCTCCGCCCTGATGATCTCGTTTCGGG 200
||||||||.|||||||||||.|||||.||.||.||.|||.|.|||.|.||
RBAM_008290__ 151 ATTTTGTCGGCGAAGCACGGATTCCTTCGTCCGGACGATATGGTTCCCGG 200
BSNT_01342___ 201 AAATTACGATGTCACTTTTGGCACCGGTCATCCGGAAATCATGACAGCGG 250
|||||||||||||||||||||.||||||||||||||.||||||.||||||
RBAM_008290__ 201 AAATTACGATGTCACTTTTGGAACCGGTCATCCGGAGATCATGGCAGCGG 250
BSNT_01342___ 251 ACGAGCTGAGCCGCCAATTTCACGAAAAAGGCTTTTCTGATATCGAAGAG 300
||||||||.||||.||||||||.||||||||||||||.||.|||||||||
RBAM_008290__ 251 ACGAGCTGCGCCGTCAATTTCATGAAAAAGGCTTTTCCGACATCGAAGAG 300
BSNT_01342___ 301 CTAGTCATGCTTGGCGGAAAAAAATATCGAAGCGTTCTAAACGCCGTCAT 350
||.||||||||||||||.||||||||.||||||||.||||||||||||||
RBAM_008290__ 301 CTTGTCATGCTTGGCGGGAAAAAATACCGAAGCGTCCTAAACGCCGTCAT 350
BSNT_01342___ 351 CGGAGAACACCAGCATATCAGCTGGCCGCTATCATCTTACAAAGGCATAG 400
||||||.||.||||||||||.||||||..|.|||||.||.||||||||.|
RBAM_008290__ 351 CGGAGAGCATCAGCATATCACCTGGCCTTTGTCATCGTATAAAGGCATTG 400
BSNT_01342___ 401 GCTATATGCTCCAAGCGCTGAACCGGGCTGTTGAAGAAAAGCATGAACTG 450
||||.|||||.|||||||||||.|||||||||||||||||||||||||||
RBAM_008290__ 401 GCTACATGCTTCAAGCGCTGAATCGGGCTGTTGAAGAAAAGCATGAACTG 450
BSNT_01342___ 451 TAG----------------------------------------------- 453
.||
RBAM_008290__ 451 CAGCACGTGGATATGAAAAAAAAGAGTGTAACCACTCAATCGCCACGATA 500
BSNT_01342___ 453 - 453
RBAM_008290__ 501 G 501
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