Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01340 and RBAM_008280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:02
# Commandline: needle
# -asequence pep-align/BSNT_01340___yfjN.1.9828.seq
# -bsequence pep-align/RBAM_008280___yfjN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01340___yfjN-RBAM_008280___yfjN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01340___yfjN-RBAM_008280___yfjN.aln
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#
# Aligned_sequences: 2
# 1: BSNT_01340___yfjN
# 2: RBAM_008280___yfjN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity: 312/334 (93.4%)
# Similarity: 320/334 (95.8%)
# Gaps: 9/334 ( 2.7%)
# Score: 1670.0
#
#
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BSNT_01340___ 1 MKGFECIMTDNFWRELPRPFFVLAPMEDVTDVVFRHVVSEAGRPDVFFTE 50
|||||||||||||||||||||||||||||||||||||||||||
RBAM_008280__ 1 -------MTDNFWRELPRPFFVLAPMEDVTDVVFRHVVSEAGRPDVFFTE 43
BSNT_01340___ 51 FTNSESYCHPDGKDSVRGRLTFTEDEQPMVAHIWGDKPENFRKMSIGMAE 100
||||||||||||||||||||||||||||||||||||||||||:|||||||
RBAM_008280__ 44 FTNSESYCHPDGKDSVRGRLTFTEDEQPMVAHIWGDKPENFRQMSIGMAE 93
BSNT_01340___ 101 LGFKGLDINMGCPVPNVAGNGKGSGLICRPAVAAELIQAAKAGGLPVSVK 150
||||||||||||||||||||||||||||||.|||||||||||||||||||
RBAM_008280__ 94 LGFKGLDINMGCPVPNVAGNGKGSGLICRPEVAAELIQAAKAGGLPVSVK 143
BSNT_01340___ 151 TRLGYTDVDEWREWLTHILKQDIANLSIHLRTRAEMSKVDAHWELIPEIK 200
|||||||:||||.|||||||||||||||||||||||||||||||||||||
RBAM_008280__ 144 TRLGYTDIDEWRGWLTHILKQDIANLSIHLRTRAEMSKVDAHWELIPEIK 193
BSNT_01340___ 201 KLRDEVAPDTLLTINGDIPDRQTGLKLAEQYGVDGIMIGRGIFTNPFAFE 250
|||||:|||||||||||||||:||||||||||||||||||||||||||||
RBAM_008280__ 194 KLRDEIAPDTLLTINGDIPDRETGLKLAEQYGVDGIMIGRGIFTNPFAFE 243
BSNT_01340___ 251 KEPKEHSSKELLDLLRLHLDLHEKYSALEARPYKPLPRFFKIYLRGFRGA 300
|||:||||||||||||||||||::||..|||.||||||||||||||||||
RBAM_008280__ 244 KEPREHSSKELLDLLRLHLDLHDEYSKAEARAYKPLPRFFKIYLRGFRGA 293
BSNT_01340___ 301 SELRNQCMNTKSTDEVRALLDDFERKYLDGVE-- 332
||||||||||||||||||||||||||||||:|
RBAM_008280__ 294 SELRNQCMNTKSTDEVRALLDDFERKYLDGMEQE 327
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