Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01333 and RBAM_008210

See DNA alignment / Visit BSNT_01333 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:02
# Commandline: needle
#    -asequence pep-align/BSNT_01333___yfjR.1.9828.seq
#    -bsequence pep-align/RBAM_008210___yfjR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01333___yfjR-RBAM_008210___yfjR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01333___yfjR-RBAM_008210___yfjR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01333___yfjR
# 2: RBAM_008210___yfjR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     224/286 (78.3%)
# Similarity:   261/286 (91.3%)
# Gaps:           0/286 ( 0.0%)
# Score: 1150.0
# 
#
#=======================================

BSNT_01333___      1 MKIAVIGLGNMGQPIARNVLQAGYELTVYNRTKQKTEELVTEGAQAADTP     50
                     ||||::||||||:|||.|:::|||.||||||||:|..:|:.:||:.|:||
RBAM_008210__      1 MKIAIVGLGNMGRPIAENIMKAGYSLTVYNRTKEKAADLLDKGAEYAETP     50

BSNT_01333___     51 RLAAKSADIVITMLADDDSVSTVTFGEDGLLEGLAENGIHISMSTISVEF    100
                     |.||:.||||::||:|||:|:.||||..|::.||:||||||||||||...
RBAM_008210__     51 RQAAEHADIVLSMLSDDDAVTDVTFGACGIIAGLSENGIHISMSTISTAL    100

BSNT_01333___    101 SEKLAAAHAEKGQFFLAAPVLGRPDAAAKAALRIITAGPAEAKQAAKPLL    150
                     ||:|:|||:.:||.|:|||||||||||.||.||||||||||||:.|:|||
RBAM_008210__    101 SEQLSAAHSGRGQSFIAAPVLGRPDAAEKAELRIITAGPAEAKKKAEPLL    150

BSNT_01333___    151 DSLSQQVFDVGEESKTANAAKISINFLLVSMLEALSESFLMMEKYGLEQK    200
                     :.|||||||.|||:|||||||||:||||||||||||||||||||||||||
RBAM_008210__    151 NILSQQVFDTGEETKTANAAKISVNFLLVSMLEALSESFLMMEKYGLEQK    200

BSNT_01333___    201 QFLEIASALFGSPVYQNYGTIMAEQKFEPAGFKMSLGLKDTNLALAAAKR    250
                     ||||||.|||||||||||||:|||||||||||||||||||||||||||::
RBAM_008210__    201 QFLEIAGALFGSPVYQNYGTMMAEQKFEPAGFKMSLGLKDTNLALAAAEQ    250

BSNT_01333___    251 VSANLPLAELAKSHFENGIEKGFGDLDWAALIKCIK    286
                     |||.||||||||||||:||.:|||||||||||||:|
RBAM_008210__    251 VSAKLPLAELAKSHFESGIAQGFGDLDWAALIKCLK    286


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