Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01333 and RBAM_008210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:02
# Commandline: needle
# -asequence pep-align/BSNT_01333___yfjR.1.9828.seq
# -bsequence pep-align/RBAM_008210___yfjR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01333___yfjR-RBAM_008210___yfjR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01333___yfjR-RBAM_008210___yfjR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01333___yfjR
# 2: RBAM_008210___yfjR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity: 224/286 (78.3%)
# Similarity: 261/286 (91.3%)
# Gaps: 0/286 ( 0.0%)
# Score: 1150.0
#
#
#=======================================
BSNT_01333___ 1 MKIAVIGLGNMGQPIARNVLQAGYELTVYNRTKQKTEELVTEGAQAADTP 50
||||::||||||:|||.|:::|||.||||||||:|..:|:.:||:.|:||
RBAM_008210__ 1 MKIAIVGLGNMGRPIAENIMKAGYSLTVYNRTKEKAADLLDKGAEYAETP 50
BSNT_01333___ 51 RLAAKSADIVITMLADDDSVSTVTFGEDGLLEGLAENGIHISMSTISVEF 100
|.||:.||||::||:|||:|:.||||..|::.||:||||||||||||...
RBAM_008210__ 51 RQAAEHADIVLSMLSDDDAVTDVTFGACGIIAGLSENGIHISMSTISTAL 100
BSNT_01333___ 101 SEKLAAAHAEKGQFFLAAPVLGRPDAAAKAALRIITAGPAEAKQAAKPLL 150
||:|:|||:.:||.|:|||||||||||.||.||||||||||||:.|:|||
RBAM_008210__ 101 SEQLSAAHSGRGQSFIAAPVLGRPDAAEKAELRIITAGPAEAKKKAEPLL 150
BSNT_01333___ 151 DSLSQQVFDVGEESKTANAAKISINFLLVSMLEALSESFLMMEKYGLEQK 200
:.|||||||.|||:|||||||||:||||||||||||||||||||||||||
RBAM_008210__ 151 NILSQQVFDTGEETKTANAAKISVNFLLVSMLEALSESFLMMEKYGLEQK 200
BSNT_01333___ 201 QFLEIASALFGSPVYQNYGTIMAEQKFEPAGFKMSLGLKDTNLALAAAKR 250
||||||.|||||||||||||:|||||||||||||||||||||||||||::
RBAM_008210__ 201 QFLEIAGALFGSPVYQNYGTMMAEQKFEPAGFKMSLGLKDTNLALAAAEQ 250
BSNT_01333___ 251 VSANLPLAELAKSHFENGIEKGFGDLDWAALIKCIK 286
|||.||||||||||||:||.:|||||||||||||:|
RBAM_008210__ 251 VSAKLPLAELAKSHFESGIAQGFGDLDWAALIKCLK 286
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