Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01324 and RBAM_008140
See
DNA alignment /
Visit
BSNT_01324 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:01
# Commandline: needle
# -asequence pep-align/BSNT_01324___yfkF.1.9828.seq
# -bsequence pep-align/RBAM_008140___yfkF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01324___yfkF-RBAM_008140___yfkF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01324___yfkF-RBAM_008140___yfkF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01324___yfkF
# 2: RBAM_008140___yfkF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 392
# Identity: 318/392 (81.1%)
# Similarity: 352/392 (89.8%)
# Gaps: 1/392 ( 0.3%)
# Score: 1689.0
#
#
#=======================================
BSNT_01324___ 1 MSRFHFFILVLLVSISGFSQGMLLPVISIIFETNGESAAINGLHATGLYI 50
|||.:|||||||||||||||||||||||:|||||||||||||||||||||
RBAM_008140__ 1 MSRLYFFILVLLVSISGFSQGMLLPVISVIFETNGESAAINGLHATGLYI 50
BSNT_01324___ 51 GVLLASPFMEAPLRKLGFKPLIVMGGSIVILSLFGFIWLQSVWVWFLLRL 100
|||||||||||||||||||||:||||.:||:|||.||||||:|:||.|||
RBAM_008140__ 51 GVLLASPFMEAPLRKLGFKPLMVMGGFLVIISLFSFIWLQSIWLWFFLRL 100
BSNT_01324___ 101 FIGIGDHMLHFSTQTWVTSMSSKQNRGRNLSIYGLSFGLGFAAGPFMVPL 150
.||||||||||||||||||.|:.:|||||:|:||||||||||.|||||||
RBAM_008140__ 101 LIGIGDHMLHFSTQTWVTSKSTPRNRGRNISLYGLSFGLGFAVGPFMVPL 150
BSNT_01324___ 151 VKLSPSLPFIVSGCISLFAWLFVFFLQNAYPETSPHETKSDNSFRRFYQA 200
||.||||||||||||||.||||||.|:|.||...|.||..|||.:|||:|
RBAM_008140__ 151 VKTSPSLPFIVSGCISLAAWLFVFVLRNEYPAQGPDETSGDNSAKRFYRA 200
BSNT_01324___ 201 MLFGWVAFMPTFGYGFLETALNGSFPVYALRLGISVDAVAIILPAFAIGS 250
:|||||||:|.|||||||||||||||||||||||||||||:|||||||||
RBAM_008140__ 201 LLFGWVAFLPAFGYGFLETALNGSFPVYALRLGISVDAVALILPAFAIGS 250
BSNT_01324___ 251 IIFQFPLGILSDKYGRRNVLLVILLTGALCFFIAGVFPSPYVIGGCFFIA 300
|:||||||:|||::||:.|||||||||||||..||:||||.|||||||.|
RBAM_008140__ 251 IVFQFPLGLLSDRFGRKRVLLVILLTGALCFLTAGLFPSPSVIGGCFFTA 300
BSNT_01324___ 301 GMAVGSTFTLGISYMTDLLPPHLLPAGNLLCGITFSLGSILGPVAGGWYM 350
||||||.|:||||||:||||.||||||||||||:|||||::|||||||||
RBAM_008140__ 301 GMAVGSMFSLGISYMSDLLPSHLLPAGNLLCGISFSLGSMIGPVAGGWYM 350
BSNT_01324___ 351 QTFESANLFYFITLTLSAVWLALVLGKPKSWSPAETYSSSS- 391
|.|||||||||||:.|..:|||||.||.|....:|::|..:
RBAM_008140__ 351 QRFESANLFYFITVILVCIWLALVFGKTKHSPASESHSFPAS 392
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.