Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01322 and RBAM_008130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:01
# Commandline: needle
# -asequence pep-align/BSNT_01322___yfkH.1.9828.seq
# -bsequence pep-align/RBAM_008130___yfkH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01322___yfkH-RBAM_008130___yfkH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01322___yfkH-RBAM_008130___yfkH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01322___yfkH
# 2: RBAM_008130___yfkH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity: 225/279 (80.6%)
# Similarity: 255/279 (91.4%)
# Gaps: 4/279 ( 1.4%)
# Score: 1196.0
#
#
#=======================================
BSNT_01322___ 1 MSFLKELFSRYTLHEGQSKSAELAYFFLLSLFPFLIFMLTLTAYLPLSTD 50
|||:||||:|::|||||||||||||||||||||.:|||||||||||:|.:
RBAM_008130__ 1 MSFIKELFARFSLHEGQSKSAELAYFFLLSLFPLMIFMLTLTAYLPISAE 50
BSNT_01322___ 51 DVLGVIEQYAPASAMSLVESITHQTLNNRNGGLLSFGIIAALWSASNGMN 100
||||.::||||.||||:|:|||.||||.|:||||||||||.:||||||||
RBAM_008130__ 51 DVLGAVDQYAPDSAMSMVKSITEQTLNKRSGGLLSFGIIAVIWSASNGMN 100
BSNT_01322___ 101 AIVRSLNHAYDVEENRSFIIVRLTSIFLTIAMVFTILVALLLPVFGREIG 150
||||:.||||:|||||||||:||||||||||||.|||:||||||||||||
RBAM_008130__ 101 AIVRAFNHAYEVEENRSFIIIRLTSIFLTIAMVVTILIALLLPVFGREIG 150
BSNT_01322___ 151 RLASDFVGASDLFLSVWAAIRWGVSPLVLLIVFSALYVIAPNKKLSLRFV 200
.||:||:|||.|||.||:.:|||:|||:|||||:|||:.||||:||||||
RBAM_008130__ 151 MLAADFIGASGLFLQVWSVVRWGISPLILLIVFTALYIFAPNKRLSLRFV 200
BSNT_01322___ 201 MPGAVFATIGWIVVSTLFSFYVSTFANYSATYGSIGGIIVLMIWFYLSGI 250
:||||||..|||:||.||||||.||||||||||||||||||||||||:|.
RBAM_008130__ 201 LPGAVFAAAGWIIVSMLFSFYVGTFANYSATYGSIGGIIVLMIWFYLTGT 250
BSNT_01322___ 251 LIILGGEINALLHKRKKLPDENPYH---- 275
|:||||||||||||||||||||||.
RBAM_008130__ 251 LLILGGEINALLHKRKKLPDENPYRGSKL 279
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