Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01321 and RBAM_008120

See DNA alignment / Visit BSNT_01321 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence pep-align/BSNT_01321___yfkI.1.9828.seq
#    -bsequence pep-align/RBAM_008120___yfkI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01321___yfkI-RBAM_008120___yfkI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01321___yfkI-RBAM_008120___yfkI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01321___yfkI
# 2: RBAM_008120___yfkI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:      53/108 (49.1%)
# Similarity:    76/108 (70.4%)
# Gaps:           2/108 ( 1.9%)
# Score: 289.0
# 
#
#=======================================

BSNT_01321___      1 MNNERLMLKGIFLGAAAGAALSLLHKPTRQACGMRWLTCKHKLSLYKSNP     50
                     |...|:|.|.|.:|||||.||||||||||:||......|:.:.:.|:.:|
RBAM_008120__      1 MKQTRIMAKAILIGAAAGGALSLLHKPTREACFRNMDACRRRAAFYRKHP     50

BSNT_01321___     51 ELLKNTVITKVDEAKKLAQTLSKEVDFVNQQVKELKKTTPQVMELVQETK    100
                     |.||.....|:|:.|.:|.|:|:::.|:|.|:.:||:|||||::|::|||
RBAM_008120__     51 EALKQQASAKLDQVKIIANTVSEDLSFLNGQITKLKQTTPQVIDLLKETK    100

BSNT_01321___    101 EHFSKK--    106
                     |||||.  
RBAM_008120__    101 EHFSKNDH    108


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.