Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01320 and RBAM_008110

See DNA alignment / Visit BSNT_01320 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence pep-align/BSNT_01320___yfkJ.1.9828.seq
#    -bsequence pep-align/RBAM_008110___yfkJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01320___yfkJ-RBAM_008110___yfkJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01320___yfkJ-RBAM_008110___yfkJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01320___yfkJ
# 2: RBAM_008110___yfkJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:     110/157 (70.1%)
# Similarity:   127/157 (80.9%)
# Gaps:           1/157 ( 0.6%)
# Score: 585.0
# 
#
#=======================================

BSNT_01320___      1 MISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWHIGNP     50
                     ||.|||||||||||||||||:|.|:..|.||.|:|..||||||.||.|||
RBAM_008110__      1 MIHVLFVCLGNICRSPMAEAVFSDMVKKNGLNGQINIDSAGIGAWHAGNP     50

BSNT_01320___     51 PHEGTQEILRREGISFDGMLARQVSEQDLDDFDYIIAMDAENIGSLRSMA    100
                     |||||:|||:::|||..|:.||||.|.||.||||:|||||||||.|||||
RBAM_008110__     51 PHEGTKEILKKKGISASGITARQVRESDLTDFDYVIAMDAENIGHLRSMA    100

BSNT_01320___    101 GFKNTS-HIKRLLDYVEDSDLADVPDPYYTGNFEEVCQLIKSGCEHLLAS    149
                     |:|..: .|.||||||.:|||||||||||||||.||..|::|||.|||.:
RBAM_008110__    101 GYKKAAPRIARLLDYVPESDLADVPDPYYTGNFSEVYALVESGCRHLLET    150

BSNT_01320___    150 IQKEKQL    156
                     |:|:..|
RBAM_008110__    151 IKKDHHL    157


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