Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01320 and RBAM_008110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:01
# Commandline: needle
# -asequence dna-align/BSNT_01320___yfkJ.1.9828.seq
# -bsequence dna-align/RBAM_008110___yfkJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01320___yfkJ-RBAM_008110___yfkJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01320___yfkJ-RBAM_008110___yfkJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01320___yfkJ
# 2: RBAM_008110___yfkJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 496
# Identity: 327/496 (65.9%)
# Similarity: 327/496 (65.9%)
# Gaps: 47/496 ( 9.5%)
# Score: 981.0
#
#
#=======================================
BSNT_01320___ 1 ATGATAAGCGTGTTATTTGTTTGTTTAGGTAACATTTGCCGGTCTCCGAT 50
||||||...|||.|.|||||.|||.|.||.||.|||||||||||.||.||
RBAM_008110__ 1 ATGATACATGTGCTGTTTGTCTGTCTGGGAAATATTTGCCGGTCGCCTAT 50
BSNT_01320___ 51 GGCGGAAGCGAT-TTTTCGGGACCTG--GCAGCCAAAAAAGGATTAGAGG 97
|||.||.|||.| ||||| .||..|| |.|| |||||.||..|..|.|
RBAM_008110__ 51 GGCAGAGGCGGTATTTTC-TGATATGGTGAAG--AAAAACGGGCTGAATG 97
BSNT_01320___ 98 GGAAAATCAAGGCGGACTCAGCCGGTATTGGCGGCTGGCACATCGGCAAC 147
||.|.||.||....||.|||||.||.||.||||.||||||....||.||.
RBAM_008110__ 98 GGCAGATTAACATTGATTCAGCGGGAATCGGCGCCTGGCATGCGGGAAAT 147
BSNT_01320___ 148 CCCCCGCATGAGGGAACGCAGGAGATATTGC-----GCAGAGAAGGAATC 192
||.||||||||.||.||..||||||| | |.||| ||||.|||
RBAM_008110__ 148 CCGCCGCATGAAGGGACAAAGGAGAT----CCTAAAGAAGA-AAGGGATC 192
BSNT_01320___ 193 AGCTTTGATGGCATGC-------TGGCGCGTCAAGTCAGCGAACAGGATC 235
||| |||.|| .||||.|.||.||..|.||....||||
RBAM_008110__ 193 AGC-------GCAAGCGGCATCACGGCGAGGCAGGTGCGTGAGTCTGATC 235
BSNT_01320___ 236 TGGACGATTTTGATTACATCATTGCAATGGATGCAGAAAATATCGGAAGT 285
||..|||||||||||||.|||||||.|||||||||||||||||||||..|
RBAM_008110__ 236 TGACCGATTTTGATTACGTCATTGCGATGGATGCAGAAAATATCGGACAT 285
BSNT_01320___ 286 CTCAGAAGCATGGCGGGTTTTAAAAA-----CACCTCGCATATCAAAAGG 330
||..|.||||||||.||||.|||||| |.| |||.|||...||||
RBAM_008110__ 286 CTGCGCAGCATGGCCGGTTATAAAAAAGCGGCGC--CGCGTATTGCAAGG 333
BSNT_01320___ 331 CT-CTTGGACTATGTTGAAGATTCAGATCTGGCTGACGTTCCCGATCCTT 379
|| ||| ||.|||||....||.||.||.||.||.|||||.||||||||.|
RBAM_008110__ 334 CTGCTT-GATTATGTACCGGAGTCGGACCTTGCGGACGTGCCCGATCCGT 382
BSNT_01320___ 380 ACTACACAGGGAATTTTGAAGAAGTCTGCCAATTAATCAAATCGGGCTGT 429
|.||.||.||||||||....||.||.|.|...||..||.|.||.||.||.
RBAM_008110__ 383 ATTATACCGGGAATTTCAGCGAGGTGTACGCTTTGGTCGAGTCCGGGTGC 432
BSNT_01320___ 430 GAGCATCTGCTTGCGTCTATTCAAAAAGAAA----AACAATTGTGA 471
...|||.||||.|.|.|.|| ||||||| |.||.||.|.|
RBAM_008110__ 433 CGTCATTTGCTGGAGACAAT----AAAGAAAGATCATCATTTATAA 474
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