Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01318 and RBAM_008100

See DNA alignment / Visit BSNT_01318 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:00
# Commandline: needle
#    -asequence pep-align/BSNT_01318___yfkK.1.9828.seq
#    -bsequence pep-align/RBAM_008100___yfkK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01318___yfkK-RBAM_008100___yfkK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01318___yfkK-RBAM_008100___yfkK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01318___yfkK
# 2: RBAM_008100___yfkK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 71
# Identity:      61/71 (85.9%)
# Similarity:    65/71 (91.5%)
# Gaps:           0/71 ( 0.0%)
# Score: 298.0
# 
#
#=======================================

BSNT_01318___      1 MSSPNTETLTQMIEEISQKLNMLNVGVIKAEDFSDEKIEDLTYLHSMVMK     50
                     |.|..||||.:|||:|||||||||||||:||||||||||||||||.||||
RBAM_008100__      1 MPSQQTETLNKMIEDISQKLNMLNVGVIRAEDFSDEKIEDLTYLHQMVMK     50

BSNT_01318___     51 KESFSPSEMQAIAQELASLRK     71
                     |.|||||||||||:|||||||
RBAM_008100__     51 KTSFSPSEMQAIAEELASLRK     71


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