Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01318 and RBAM_008100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_01318___yfkK.1.9828.seq
# -bsequence dna-align/RBAM_008100___yfkK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01318___yfkK-RBAM_008100___yfkK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01318___yfkK-RBAM_008100___yfkK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01318___yfkK
# 2: RBAM_008100___yfkK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 175/217 (80.6%)
# Similarity: 175/217 (80.6%)
# Gaps: 2/217 ( 0.9%)
# Score: 695.0
#
#
#=======================================
BSNT_01318___ 1 TTGTCCAGCCCAAATACAGAAACATTAACTCAAATGATTGAAGAGATTTC 50
|||.|.||||.|.|.||||||||.||||...|||||||||||||.|||||
RBAM_008100__ 1 TTGCCGAGCCAACAAACAGAAACGTTAAACAAAATGATTGAAGATATTTC 50
BSNT_01318___ 51 CCAAAAGCTGAACATGCTGAACGTCGGCGTAATCAAAGCGGAGGATTTCA 100
.||||||||.||||||||.||.||||||||.||.|.||||||.|||||||
RBAM_008100__ 51 GCAAAAGCTCAACATGCTCAATGTCGGCGTCATAAGAGCGGAAGATTTCA 100
BSNT_01318___ 101 GTGATGAGAAGATTGAAGACCTCACGTACCTTCA-CAGCATGGTGATGAA 149
|||||||.||.||.|||||.||.||.|||||||| || .|||||.|||||
RBAM_008100__ 101 GTGATGAAAAAATAGAAGATCTTACATACCTTCATCA-AATGGTCATGAA 149
BSNT_01318___ 150 AAAAGAATCATTCAGCCCAAGTGAAATGCAGGCGATTGCTCAAGAATTAG 199
||||..||||||||||||.||||||||||||||.|||||..|.||..|.|
RBAM_008100__ 150 AAAAACATCATTCAGCCCGAGTGAAATGCAGGCCATTGCCGAGGAGCTCG 199
BSNT_01318___ 200 CCTCGCTTCGTAAATAA 216
||||.||..|.||||||
RBAM_008100__ 200 CCTCTCTCAGAAAATAA 216
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