Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01316 and RBAM_008090
See
DNA alignment /
Visit
BSNT_01316 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence pep-align/BSNT_01316___yfkL.1.9828.seq
# -bsequence pep-align/RBAM_008090___yfkL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01316___yfkL-RBAM_008090___yfkL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01316___yfkL-RBAM_008090___yfkL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01316___yfkL
# 2: RBAM_008090___yfkL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 400
# Identity: 189/400 (47.2%)
# Similarity: 276/400 (69.0%)
# Gaps: 7/400 ( 1.8%)
# Score: 995.0
#
#
#=======================================
BSNT_01316___ 1 MQTTSIKTASGMYINYFFLGMVNIILASNMSSLTKQWNTDPTGISYVIAA 50
|:....|.|:|:|||||.|||:|||:||||.:|:||.:|...|:||:::|
RBAM_008090__ 1 MKNIYTKMAAGLYINYFLLGMINIIIASNMEALSKQLHTSAAGVSYLVSA 50
BSNT_01316___ 51 IGFGKLLTYGISGVLSDKIGRKPLVVASAGIMAVFLVGIPLSPSYELAFV 100
||.|||::...:|.|||..||:|.:|:.|.:..:||:|||||.:|..||:
RBAM_008090__ 51 IGIGKLISLLFAGKLSDTFGRRPFIVSGAFLYLIFLIGIPLSTNYTAAFI 100
BSNT_01316___ 101 FALLAGVANSAMDAGTYPALTELFPSASGSANVLVKAFMSVGAALLPLLI 150
||:.||:|||.:|:||||||.|.||..:.||.||:|||:|:||.:||..|
RBAM_008090__ 101 FAIFAGIANSFLDSGTYPALIEGFPKNASSATVLIKAFVSIGATVLPFFI 150
BSNT_01316___ 151 TFLADHSMFYGFAFYLPAAVYLLNIIYLSTLSFPKKHKKPTNSGQQE-SP 199
.|:||..:|||:.|::|..::.||..:|..:.|| .||:..:.|:.| ||
RBAM_008090__ 151 AFIADRHLFYGWTFFVPGIIFFLNGFFLLKVPFP-NHKQKEDGGRTEASP 199
BSNT_01316___ 200 ---VFLSEPVFQKEGTALIIIGFTSTALFTVSQIWLPSYAQKAAGLAESA 246
.|..:|...:||.|:|::||:|||||.:.|:|||.:.|...|:.|..
RBAM_008090__ 200 SDDAFTLQPSIWREGLAIILLGFSSTALFMLVQVWLPKFGQTVLGMPEVQ 249
BSNT_01316___ 247 SVQLLSYYSIGSLASVLLLAVLLNRWVKPVFITLLYPIITLCTLAVMLTV 296
:|:||||||||:|.|||||||||||.::|:.:.:|||:|....|..::.:
RBAM_008090__ 250 AVKLLSYYSIGALVSVLLLAVLLNRVIQPITVMVLYPVIAAIALLALIFI 299
BSNT_01316___ 297 HIPVVLDITAFFLGFSTAGVFQITITLMTELFWKRKGTVTGIVATASSLA 346
|.|.|..|::|.:|.||||:.|:.:|:|..||.|.|||:|..|..||||:
RBAM_008090__ 300 HQPAVSVISSFVIGLSTAGILQLAMTVMAVLFPKNKGTITSFVNIASSLS 349
BSNT_01316___ 347 SILLPIATGLIAKAGGIAHIFIFDFAIAVIGTAAAAFLYYRYKKLTGAQA 396
.|::|:.||.|:||.|:..:|:.|..||.:....|.|:..|:|::..|
RBAM_008090__ 350 FIVIPLVTGAISKAAGLTPVFLLDIGIAAVSALLALFIGIRFKQVMKA-- 397
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.