Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03434 and RBAM_008080

See DNA alignment / Visit BSNT_03434 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:39
# Commandline: needle
#    -asequence pep-align/BSNT_03434___aroC.1.9828.seq
#    -bsequence pep-align/RBAM_008080___aroD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03434___aroC-RBAM_008080___aroD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03434___aroC-RBAM_008080___aroD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03434___aroC
# 2: RBAM_008080___aroD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     164/255 (64.3%)
# Similarity:   199/255 (78.0%)
# Gaps:           2/255 ( 0.8%)
# Score: 844.0
# 
#
#=======================================

BSNT_03434___      1 MNVLTIKGVSIGEGMPKIIVPLMGKTEKQILNEAEAVKLLNPDIVEWRVD     50
                     |..:||:...||||:||||||||...||::|.|.|||..|.|||:|||.|
RBAM_008080__      1 MQSITIRNTVIGEGLPKIIVPLMAAGEKELLEEIEAVNRLRPDIIEWRAD     50

BSNT_03434___     51 VFEKANDREAVTKLISKLRKSLEDKLFLFTFRTHKEGGSMEMDESSYLAL    100
                     |:|..:..:||..::..|||:......|||||||||||:..:|:..|:.|
RBAM_008080__     51 VYEHVDSLDAVKDMLEMLRKAAGATPLLFTFRTHKEGGNKVIDDRFYIEL    100

BSNT_03434___    101 LESAIQTKDIDLIDIELFSGDANVKALVSLAEENNVYVVMSNHDFEKTPS    150
                     |::||:||.|||.|:|||:|:|.||.:|..||:|.||||||||||.:||.
RBAM_008080__    101 LKTAIETKHIDLADVELFTGEAEVKLIVKTAEDNGVYVVMSNHDFHQTPK    150

BSNT_03434___    151 KDEILSRLRKMQELGAHIPKMAVMPNDTGDLLTLLDATYTMKTKYADRPI    200
                     |:||:||||.||..||||||:||||..|.|:..|||||:||||:||||||
RBAM_008080__    151 KEEIISRLRNMQAYGAHIPKIAVMPQSTEDVFVLLDATHTMKTQYADRPI    200

BSNT_03434___    201 ITMSMAATGLISRLSGEVFGSACTFGAGEEASAPGQIPVSELRSVLDILH    250
                     ||||||.|||||||:|||||||||||||:||||||||||.||||||.||:
RBAM_008080__    201 ITMSMAGTGLISRLAGEVFGSACTFGAGKEASAPGQIPVEELRSVLSILN    250

BSNT_03434___    251 KNTRG    255
                     |:.  
RBAM_008080__    251 KHM--    253


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