Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01313 and RBAM_008040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence pep-align/BSNT_01313___yfkM.1.9828.seq
# -bsequence pep-align/RBAM_008040___yfkM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01313___yfkM-RBAM_008040___yfkM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01313___yfkM-RBAM_008040___yfkM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01313___yfkM
# 2: RBAM_008040___yfkM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity: 154/172 (89.5%)
# Similarity: 163/172 (94.8%)
# Gaps: 1/172 ( 0.6%)
# Score: 796.0
#
#
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BSNT_01313___ 1 MGKKIAVVLTDYFEDSEYTEPAKAFKEAGHELTVIEKEKGKTVKGKQGKA 50
|||||||||||||||.||||||||||:|||||||||:|||||||||||:|
RBAM_008040__ 1 MGKKIAVVLTDYFEDVEYTEPAKAFKDAGHELTVIEQEKGKTVKGKQGEA 50
BSNT_01313___ 51 EVTVDASIDDVNPSDFDALLIPGGFSPDQLRADDRFVQFTKAFMTDKKPV 100
||.||||||||||.||||||||||||||.||||||||||.||||.|||||
RBAM_008040__ 51 EVKVDASIDDVNPKDFDALLIPGGFSPDMLRADDRFVQFAKAFMDDKKPV 100
BSNT_01313___ 101 FAICHGPQLLINAKALDGRKATGYTSIRVDMENAGADVVDKEVVVCQDQL 150
|||||||||||||||||||||||:||||:|||||||:|||:||||||:||
RBAM_008040__ 101 FAICHGPQLLINAKALDGRKATGFTSIRIDMENAGANVVDEEVVVCQNQL 150
BSNT_01313___ 151 VTSRTPEDIPAFNRESLALLEK 172
||||||:||||||||||.||.
RBAM_008040__ 151 VTSRTPDDIPAFNRESLKLLA- 171
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