Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01313 and RBAM_008040

See DNA alignment / Visit BSNT_01313 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:00
# Commandline: needle
#    -asequence pep-align/BSNT_01313___yfkM.1.9828.seq
#    -bsequence pep-align/RBAM_008040___yfkM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01313___yfkM-RBAM_008040___yfkM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01313___yfkM-RBAM_008040___yfkM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01313___yfkM
# 2: RBAM_008040___yfkM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:     154/172 (89.5%)
# Similarity:   163/172 (94.8%)
# Gaps:           1/172 ( 0.6%)
# Score: 796.0
# 
#
#=======================================

BSNT_01313___      1 MGKKIAVVLTDYFEDSEYTEPAKAFKEAGHELTVIEKEKGKTVKGKQGKA     50
                     |||||||||||||||.||||||||||:|||||||||:|||||||||||:|
RBAM_008040__      1 MGKKIAVVLTDYFEDVEYTEPAKAFKDAGHELTVIEQEKGKTVKGKQGEA     50

BSNT_01313___     51 EVTVDASIDDVNPSDFDALLIPGGFSPDQLRADDRFVQFTKAFMTDKKPV    100
                     ||.||||||||||.||||||||||||||.||||||||||.||||.|||||
RBAM_008040__     51 EVKVDASIDDVNPKDFDALLIPGGFSPDMLRADDRFVQFAKAFMDDKKPV    100

BSNT_01313___    101 FAICHGPQLLINAKALDGRKATGYTSIRVDMENAGADVVDKEVVVCQDQL    150
                     |||||||||||||||||||||||:||||:|||||||:|||:||||||:||
RBAM_008040__    101 FAICHGPQLLINAKALDGRKATGFTSIRIDMENAGANVVDEEVVVCQNQL    150

BSNT_01313___    151 VTSRTPEDIPAFNRESLALLEK    172
                     ||||||:||||||||||.||. 
RBAM_008040__    151 VTSRTPDDIPAFNRESLKLLA-    171


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