Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01306 and RBAM_008000

See DNA alignment / Visit BSNT_01306 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence pep-align/BSNT_01306___yfkO.1.9828.seq
#    -bsequence pep-align/RBAM_008000___yfkO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01306___yfkO-RBAM_008000___yfkO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01306___yfkO-RBAM_008000___yfkO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01306___yfkO
# 2: RBAM_008000___yfkO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity:     186/221 (84.2%)
# Similarity:   209/221 (94.6%)
# Gaps:           0/221 ( 0.0%)
# Score: 1018.0
# 
#
#=======================================

BSNT_01306___      1 MADLKKQILDAYNFRHATKEFDPNKKVSDSDFEFILETGRLSPSSLGLEP     50
                     |:|.|:||::||.||||||||||.||:|:|||||||||||||||||||||
RBAM_008000__      1 MSDKKQQIIEAYQFRHATKEFDPEKKISESDFEFILETGRLSPSSLGLEP     50

BSNT_01306___     51 WKFVVVQNPEFREKLREYTWGAQKQLPTASHFVLILARTAKDIKYNADYI    100
                     ||||||||||.||||||:||||||||||||||||:||||||||:::|||:
RBAM_008000__     51 WKFVVVQNPELREKLREFTWGAQKQLPTASHFVLLLARTAKDIRFDADYV    100

BSNT_01306___    101 KRHLKEVKQMPQDVYEGYLSKTEEFQKNDLHLLESDRTLFDWASKQTYIA    150
                     |.||:|||:||:|:||||:||||:|||||.:||||||.||||||||||||
RBAM_008000__    101 KNHLREVKKMPEDMYEGYISKTEDFQKNDFNLLESDRALFDWASKQTYIA    150

BSNT_01306___    151 LGNMMTAAAQIGVDSCPIEGFQYDHIHRILEEEGLLENGSFDISVMVAFG    200
                     ||||||||||||:||||:|||.|..|||||||||||||||||||||.|||
RBAM_008000__    151 LGNMMTAAAQIGIDSCPVEGFNYKEIHRILEEEGLLENGSFDISVMAAFG    200

BSNT_01306___    201 YRVRDPRPKTRSAVEDVVKWV    221
                     ||||:||||||||.:||||||
RBAM_008000__    201 YRVREPRPKTRSASKDVVKWV    221


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