Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01306 and RBAM_008000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence pep-align/BSNT_01306___yfkO.1.9828.seq
# -bsequence pep-align/RBAM_008000___yfkO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01306___yfkO-RBAM_008000___yfkO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01306___yfkO-RBAM_008000___yfkO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01306___yfkO
# 2: RBAM_008000___yfkO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity: 186/221 (84.2%)
# Similarity: 209/221 (94.6%)
# Gaps: 0/221 ( 0.0%)
# Score: 1018.0
#
#
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BSNT_01306___ 1 MADLKKQILDAYNFRHATKEFDPNKKVSDSDFEFILETGRLSPSSLGLEP 50
|:|.|:||::||.||||||||||.||:|:|||||||||||||||||||||
RBAM_008000__ 1 MSDKKQQIIEAYQFRHATKEFDPEKKISESDFEFILETGRLSPSSLGLEP 50
BSNT_01306___ 51 WKFVVVQNPEFREKLREYTWGAQKQLPTASHFVLILARTAKDIKYNADYI 100
||||||||||.||||||:||||||||||||||||:||||||||:::|||:
RBAM_008000__ 51 WKFVVVQNPELREKLREFTWGAQKQLPTASHFVLLLARTAKDIRFDADYV 100
BSNT_01306___ 101 KRHLKEVKQMPQDVYEGYLSKTEEFQKNDLHLLESDRTLFDWASKQTYIA 150
|.||:|||:||:|:||||:||||:|||||.:||||||.||||||||||||
RBAM_008000__ 101 KNHLREVKKMPEDMYEGYISKTEDFQKNDFNLLESDRALFDWASKQTYIA 150
BSNT_01306___ 151 LGNMMTAAAQIGVDSCPIEGFQYDHIHRILEEEGLLENGSFDISVMVAFG 200
||||||||||||:||||:|||.|..|||||||||||||||||||||.|||
RBAM_008000__ 151 LGNMMTAAAQIGIDSCPVEGFNYKEIHRILEEEGLLENGSFDISVMAAFG 200
BSNT_01306___ 201 YRVRDPRPKTRSAVEDVVKWV 221
||||:||||||||.:||||||
RBAM_008000__ 201 YRVREPRPKTRSASKDVVKWV 221
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