Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01306 and RBAM_008000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence dna-align/BSNT_01306___yfkO.1.9828.seq
# -bsequence dna-align/RBAM_008000___yfkO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01306___yfkO-RBAM_008000___yfkO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01306___yfkO-RBAM_008000___yfkO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01306___yfkO
# 2: RBAM_008000___yfkO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 671
# Identity: 532/671 (79.3%)
# Similarity: 532/671 (79.3%)
# Gaps: 10/671 ( 1.5%)
# Score: 2101.0
#
#
#=======================================
BSNT_01306___ 1 ATGGCAGATCTAAAGAAACAAATTCTGGATGCATA-CAATTTCAGGCATG 49
|||.|||||..|||..|.||.||..|.||.||.|| ||| |||||.||.|
RBAM_008000__ 1 ATGTCAGATAAAAAACAGCAGATCATCGAAGCGTATCAA-TTCAGACACG 49
BSNT_01306___ 50 CGACTAAGGAATTTGACCCGAATAAAAAAGTGTCAGACAGCGATTTTGAA 99
|.||.|||||||||||.||..|.||||||.|.|||||.||||||||||||
RBAM_008000__ 50 CCACAAAGGAATTTGATCCTGAGAAAAAAATTTCAGAAAGCGATTTTGAA 99
BSNT_01306___ 100 TTTATTTTAGAAACAGGAAGACTGTCTCCGAGCTCACTCGGCCTTGAGCC 149
||.|||||||||||.||||||.|.||.||.|||||||||||..|.|||||
RBAM_008000__ 100 TTCATTTTAGAAACGGGAAGATTATCCCCAAGCTCACTCGGTTTGGAGCC 149
BSNT_01306___ 150 TTGGAAATTTGTCGTCGTCCAAAATCCGGAGTTCCGCGAGAAGCTTCGTG 199
||||||||||||||||||.||||||||||||.|.||.||.||.||.||.|
RBAM_008000__ 150 TTGGAAATTTGTCGTCGTTCAAAATCCGGAGCTTCGTGAAAAACTCCGCG 199
BSNT_01306___ 200 AATACACATGGGGCGCGCAAAAGCAGCTGCCGACCGCAAGCCATTTCGTC 249
|.|.|||||||||||||||||||||||||||||||||||||||||||||.
RBAM_008000__ 200 AGTTCACATGGGGCGCGCAAAAGCAGCTGCCGACCGCAAGCCATTTCGTA 249
BSNT_01306___ 250 CTGATTCTTGCGCGTACAGCGAAGGATATCAAATATAATGCGGACTACAT 299
||..|.|||||.||.||.||.|||||||||...|.|.|.||.|||||..|
RBAM_008000__ 250 CTTCTGCTTGCCCGGACGGCAAAGGATATCCGTTTTGACGCCGACTATGT 299
BSNT_01306___ 300 CAAACGTCATTTAAAAGAAGTAAAACAAATGCCTCAAGACGTGTACGAAG 349
||||..|||.||....|||||.|||.|||||||..||||..||||.||||
RBAM_008000__ 300 CAAAAATCACTTGCGGGAAGTCAAAAAAATGCCGGAAGATATGTATGAAG 349
BSNT_01306___ 350 GCTATTTAAGCAAAACAGAAGAATTCCAGAAAAACGATTTGCATTTGCTT 399
|||||.|.||||||||.|||||.|||||||||||.|||||..|||||||.
RBAM_008000__ 350 GCTATATCAGCAAAACGGAAGACTTCCAGAAAAATGATTTCAATTTGCTA 399
BSNT_01306___ 400 GAAAGTGACAGA----ACATTGTTTGACTGGGCATCAAAACAAACCTATA 445
||| .|||| .|..||||||||||||||||.|||||.||.||.|
RBAM_008000__ 400 GAA----TCAGATCGCGCGCTGTTTGACTGGGCATCCAAACAGACTTACA 445
BSNT_01306___ 446 TCGCGCTTGGCAACATGATGACTGCCGCTGCGCAAATCGGTGTTGATTCC 495
||||.||.|||||.||||||||.|||||||||||.|||||..|.||.|||
RBAM_008000__ 446 TCGCCCTCGGCAATATGATGACAGCCGCTGCGCAGATCGGAATCGACTCC 495
BSNT_01306___ 496 TGCCCGATCGAAGGCTTCCAGTACGATCACATTCACCGTATTCTTGAAGA 545
|||||..|.|||||||||.|.|||.|..|.||||||||.|||||||||||
RBAM_008000__ 496 TGCCCTGTAGAAGGCTTCAACTACAAAGAAATTCACCGGATTCTTGAAGA 545
BSNT_01306___ 546 AGAAGGCCTTCTGGAAAACGGAAGCTTTGATATTTCTGTGATGGTGGCAT 595
||||||.|||||||||||||||||.||.||.||.|||||.||||..||||
RBAM_008000__ 546 AGAAGGGCTTCTGGAAAACGGAAGTTTCGACATCTCTGTTATGGCCGCAT 595
BSNT_01306___ 596 TCGGCTACCGTGTGAGAGACCCTCGTCCGAAAACAAGATCTGCTGTTGAA 645
|||||||||||||.|||||.||.||.|||||||||||||||||.....||
RBAM_008000__ 596 TCGGCTACCGTGTCAGAGAACCGCGCCCGAAAACAAGATCTGCCTCAAAA 645
BSNT_01306___ 646 GATGTTGTGAAATGGGTGTAA 666
||.|||||.||.|||||.|||
RBAM_008000__ 646 GACGTTGTAAAGTGGGTATAA 666
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