Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01303 and RBAM_007990

See DNA alignment / Visit BSNT_01303 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence pep-align/BSNT_01303___treR.1.9828.seq
#    -bsequence pep-align/RBAM_007990___treR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01303___treR-RBAM_007990___treR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01303___treR-RBAM_007990___treR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01303___treR
# 2: RBAM_007990___treR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     180/239 (75.3%)
# Similarity:   211/239 (88.3%)
# Gaps:           2/239 ( 0.8%)
# Score: 938.0
# 
#
#=======================================

BSNT_01303___      1 MKVNKFITIYKDIAQQIEGGRWKAEEILPSEHELTAQYGTSRETVRKALH     50
                     |||||:||||||:.:|||.|:.|||::||||::|..|||||||||||||:
RBAM_007990__      1 MKVNKYITIYKDMVRQIESGQRKAEDVLPSENDLCDQYGTSRETVRKALN     50

BSNT_01303___     51 MLAQNGYIQKIRGKGSVVLNREKMQFPVSGLVSFKELAQTLGKETKTTVH    100
                     |||||||||||:|||||:|:||||:||||||:|||||::||||||:||||
RBAM_007990__     51 MLAQNGYIQKIKGKGSVILDREKMRFPVSGLISFKELSETLGKETRTTVH    100

BSNT_01303___    101 KFGL-EPPSELIQKQLRANLDDDIWEVIRSRKIDGEHVILDKDYFFRKHV    149
                     :.|| .|||| ..|:|....|:.:|||:|||:|||||:|||||||.:|||
RBAM_007990__    101 RLGLILPPSE-AAKELGTEADEKVWEVVRSRRIDGEHIILDKDYFVKKHV    149

BSNT_01303___    150 PHLTKEICENSIYEYIEGELGLSISYAQKEIVAEPCTDEDRELLDLRGYD    199
                     |.|||.|||:|||||:||||||||||||||||.||..:|||:.|||.|:.
RBAM_007990__    150 PLLTKAICEDSIYEYLEGELGLSISYAQKEIVVEPAGEEDRKYLDLGGFS    199

BSNT_01303___    200 HMVVVRNYVFLEDTSLFQYTESRHRLDKFRFVDFARRGK    238
                     ||.||:|.|||||||||||||||||||||||||||||.|
RBAM_007990__    200 HMAVVKNRVFLEDTSLFQYTESRHRLDKFRFVDFARREK    238


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