Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01303 and RBAM_007990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence dna-align/BSNT_01303___treR.1.9828.seq
# -bsequence dna-align/RBAM_007990___treR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01303___treR-RBAM_007990___treR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01303___treR-RBAM_007990___treR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01303___treR
# 2: RBAM_007990___treR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 732
# Identity: 545/732 (74.5%)
# Similarity: 545/732 (74.5%)
# Gaps: 30/732 ( 4.1%)
# Score: 1996.5
#
#
#=======================================
BSNT_01303___ 1 ATGAAGGTGAATAAATTCATCACAATTTATAAAGACATCGCACAGCAAAT 50
|||||.||||||||||.|||||||||.||||||||.||.|..|.|||.||
RBAM_007990__ 1 ATGAAAGTGAATAAATACATCACAATCTATAAAGATATGGTGCGGCAGAT 50
BSNT_01303___ 51 TGAAGGCGGCCGATGGAAAGCGGAGGAGATTCTTCCGTCTGAACATGAGT 100
.|||.||||||...||||.||.||.||..||||||||||||||.||||.|
RBAM_007990__ 51 CGAAAGCGGCCAGCGGAAGGCTGAAGACGTTCTTCCGTCTGAAAATGATT 100
BSNT_01303___ 101 TGACCGCACAGTACGGTACATCAAGAGAAACGGTCCGAAAGGCGCTTCAT 150
||..||..||.|||||.||||||.|||||||.|||||.||.|||||..||
RBAM_007990__ 101 TGTGCGATCAATACGGCACATCACGAGAAACCGTCCGCAAAGCGCTCAAT 150
BSNT_01303___ 151 ATGCTCGCGCAAAACGGTTATATCCAGAAAATCAGGGGAAAAGGCTCCGT 200
|||||.|||||||||||.||.|||||||||||||..||.|||||||||||
RBAM_007990__ 151 ATGCTGGCGCAAAACGGCTACATCCAGAAAATCAAAGGCAAAGGCTCCGT 200
BSNT_01303___ 201 CGTGCTCAATCGTGAAAAAATGCAGTTTCCCGTTTCGGGCCTTGTCAGCT 250
|.|..|..|..|.||||||||||..||||||||.||.|||||..||||||
RBAM_007990__ 201 CATATTAGACAGAGAAAAAATGCGTTTTCCCGTCTCAGGCCTGATCAGCT 250
BSNT_01303___ 251 TCAAGGAGCTCGCGCAAACGCTTGGCAAAGAAACGAAAACAACTGTACAC 300
||||.|||||..||.|||||||.||.|||||.||||.|||.||.||.|||
RBAM_007990__ 251 TCAAAGAGCTTTCGGAAACGCTCGGAAAAGAGACGAGAACGACGGTTCAC 300
BSNT_01303___ 301 AAATTCGGGCTGGA----GCCTCCGTCAG-AGCTGATCCAAAA------- 338
....||||||| || ||||||.|||| |||.| |||||
RBAM_007990__ 301 CGTCTCGGGCT-GATCCTGCCTCCCTCAGAAGCCG---CAAAAGAGCTTG 346
BSNT_01303___ 339 --ACAGCTCCGGGCCAATCTGGATGACGACATCTGGGAAGTCATCAGGTC 386
|||| ||.| ||||||..|..|.|||||||||.||||.||
RBAM_007990__ 347 GTACAG---------AAGC-GGATGAAAAGGTGTGGGAAGTCGTCAGATC 386
BSNT_01303___ 387 TAGAAAGATTGACGGGGAACATGTGATTTTGGACAAGGATTACTTTTTCA 436
.|||..|||||||||.||||||.|.|||||||||||||||||||||.|.|
RBAM_007990__ 387 AAGACGGATTGACGGAGAACATATTATTTTGGACAAGGATTACTTTGTGA 436
BSNT_01303___ 437 GAAAGCATGTCCCTCACCTGACGAAAGAAATTTGTGAAAACTCCATATAT 486
.|||.|||||.||||...|||||||.|..|||||.|||.|.||.||.|||
RBAM_007990__ 437 AAAAACATGTGCCTCTATTGACGAAGGCGATTTGCGAAGATTCGATCTAT 486
BSNT_01303___ 487 GAATATATAGAAGGAGAGCTCGGTCTTTCGATCAGTTACGCCCAAAAAGA 536
||.|||.|.||||||||||||||.||.||.|||||.|||||.|||||.||
RBAM_007990__ 487 GAGTATCTTGAAGGAGAGCTCGGCCTGTCCATCAGCTACGCGCAAAAGGA 536
BSNT_01303___ 537 AATTGTCGCCGAGCCGTGTACGGACGAGGACAGAGAGCTGCTCGATTTAC 586
||||||||..||||||.....|||.||||||.|..||....|.|||.|..
RBAM_007990__ 537 AATTGTCGTGGAGCCGGCGGGGGAAGAGGACCGGAAGTATTTGGATCTCG 586
BSNT_01303___ 587 GCGGCTATGA-CCATATGGTCGTGGTGAGAAACTACGTCTTTTTGGAGGA 635
||||.| |.| ||||||||..||.||||.||||..|||||||||||||||
RBAM_007990__ 587 GCGGAT-TCAGCCATATGGCGGTCGTGAAAAACCGCGTCTTTTTGGAGGA 635
BSNT_01303___ 636 TACCAGTTTGTTTCAATATACGGAAAGCAGACACCGTCTCGACAAATTCC 685
||||||..|.|||||.||.|||||||||.|.|||.|.|||||.|||||||
RBAM_007990__ 636 TACCAGCCTCTTTCAGTACACGGAAAGCCGGCACAGGCTCGATAAATTCC 685
BSNT_01303___ 686 GATTTGTTGATTTTGCGCGGCGGGGGAAATGA 717
|.||.||.||.||||||.|..|.|..||||.|
RBAM_007990__ 686 GTTTCGTCGACTTTGCGAGAAGAGAAAAATAA 717
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