Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01302 and RBAM_007980

See DNA alignment / Visit BSNT_01302 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence pep-align/BSNT_01302___treA.1.9828.seq
#    -bsequence pep-align/RBAM_007980___treA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01302___treA-RBAM_007980___treA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01302___treA-RBAM_007980___treA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01302___treA
# 2: RBAM_007980___treA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 565
# Identity:     439/565 (77.7%)
# Similarity:   496/565 (87.8%)
# Gaps:           8/565 ( 1.4%)
# Score: 2442.5
# 
#
#=======================================

BSNT_01302___      1 MKTEQTPWWKKAVVYQIYPKSFNDTTGNGVGDLNGIIEKLDYLKTLQVDV     50
                     |||:.|||||||.||||||||||||||||:|||||||||||||:.|.:||
RBAM_007980__      1 MKTDSTPWWKKAAVYQIYPKSFNDTTGNGIGDLNGIIEKLDYLQKLLIDV     50

BSNT_01302___     51 LWLTPIYDSPQHDNGYDIRDYYSIYPEYGTMEDFERLVSEAHKRDLKVVM    100
                     :||||||||||:|||||||||.:||.|||||||||||:.|||||.:||||
RBAM_007980__     51 IWLTPIYDSPQNDNGYDIRDYCTIYEEYGTMEDFERLIDEAHKRGIKVVM    100

BSNT_01302___    101 DLVVNHTSTEHKWFREAISSIDSPYRDFYIWKDPQENGSVPTNWESKFGG    150
                     ||||||||.||:||:||:||.||||||||||||.:|:|..|.||||||||
RBAM_007980__    101 DLVVNHTSVEHQWFKEAVSSPDSPYRDFYIWKDGKEDGRAPNNWESKFGG    150

BSNT_01302___    151 SAWELDEASGQYYLHLFDVTQADLNWENEEVRKHVYDMMHFWFEKGIDGF    200
                     ||||||.||||:|||||||:||||||||||:||.|||||||||.||||||
RBAM_007980__    151 SAWELDPASGQHYLHLFDVSQADLNWENEEMRKQVYDMMHFWFRKGIDGF    200

BSNT_01302___    201 RLDVINLISKDQRFPNAEEG-DGRSFYTDGPRVHEFLHEMNEKVFSHYDS    249
                     ||||||||||||.||:||:| |||.:|||||||||||||||.:|||.|||
RBAM_007980__    201 RLDVINLISKDQSFPDAEDGRDGRPYYTDGPRVHEFLHEMNREVFSKYDS    250

BSNT_01302___    250 MTVGEMSSTTVDHCIRYTNPDNKELDMTFSFHHLKVDYPNGEKWALAPFD    299
                     ||||||||||.|||||||||:||||||||:||||||||||||||||||||
RBAM_007980__    251 MTVGEMSSTTADHCIRYTNPENKELDMTFNFHHLKVDYPNGEKWALAPFD    300

BSNT_01302___    300 FLKLKEILSDWQTGMHAGGGWNALFWCNHDQPRVVSRYGDDGAYRVKSAK    349
                     |||||.||:.|||.|..||||||||||||||||.||||||||.||.||||
RBAM_007980__    301 FLKLKRILAFWQTEMQKGGGWNALFWCNHDQPRAVSRYGDDGVYRTKSAK    350

BSNT_01302___    350 MLATAIHLMQGTPYIYQGEELGMTNPKFTDISSYRDVESLNMYHAFKEKG    399
                     |||.|||:||||||||||||:||.||||.||.|||||||||:|...||:|
RBAM_007980__    351 MLAAAIHMMQGTPYIYQGEEIGMGNPKFDDIGSYRDVESLNIYKKMKEEG    400

BSNT_01302___    400 MADQDITAILQAKSRDNSRTPVQWDATENGGFTTGTPWIPVAGNYREINA    449
                     :.::||.|||:.|||||:|||:||::..:|||||||||||.|.:||::||
RBAM_007980__    401 VPEKDIIAILKEKSRDNARTPIQWNSGPHGGFTTGTPWIPAADDYRDVNA    450

BSNT_01302___    450 EAALRDQNSVFYHYQKLIQIRKMYDIVTEGTYEIIAKDDPNIFAYLRHGS    499
                     ||||||.:|:||||||||::||.|:||||||:|::|:|||.:.||:|||.
RBAM_007980__    451 EAALRDPDSIFYHYQKLIKLRKEYNIVTEGTFELLAEDDPAVLAYVRHGK    500

BSNT_01302___    500 NEKLLVINNFYGTEAAFTLP--DSLAPDEWKAEVLLTNDEAREGL-QNMT    546
                     :||||.||||||.||.||:|  |:   |.|:..|||||||.|||. :.:|
RBAM_007980__    501 DEKLLCINNFYGKEADFTVPLKDT---DGWRFTVLLTNDEPREGRPERLT    547

BSNT_01302___    547 LRPYESIVYRLMKPC    561
                     |||||||||.|.|. 
RBAM_007980__    548 LRPYESIVYHLTKA-    561


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