Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01300 and RBAM_007970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence pep-align/BSNT_01300___treP.1.9828.seq
# -bsequence pep-align/RBAM_007970___treP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01300___treP-RBAM_007970___treP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01300___treP-RBAM_007970___treP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01300___treP
# 2: RBAM_007970___treP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 471
# Identity: 407/471 (86.4%)
# Similarity: 445/471 (94.5%)
# Gaps: 1/471 ( 0.2%)
# Score: 2113.0
#
#
#=======================================
BSNT_01300___ 1 MGELNKSARQIVEAVGGAENIAAATHCVTRLRFALIDESKVDQEMLDQID 50
|||.|::||||.|||||.|||.||||||||||||||||:||:|:|||.||
RBAM_007970__ 1 MGEFNRAARQIAEAVGGIENIEAATHCVTRLRFALIDETKVNQKMLDAID 50
BSNT_01300___ 51 AVKGSFSTNGQFQVVIGQGTVNKVYAELVKETGIGESTKDEVKKASEKNM 100
.|||||:.||||||||||||||||||||||||||||::||:||||:.:.|
RBAM_007970__ 51 IVKGSFAVNGQFQVVIGQGTVNKVYAELVKETGIGEASKDDVKKAAAQKM 100
BSNT_01300___ 101 NPLQRTVKTLADIFIPILPAIVTAGLLMGINNILTAEGIFFSTKSIVQVY 150
|||||.|||||||||||||||||||||||:||||||||||:|.|||||||
RBAM_007970__ 101 NPLQRAVKTLADIFIPILPAIVTAGLLMGLNNILTAEGIFYSAKSIVQVY 150
BSNT_01300___ 151 PQWADLANMINLIAGTAFTFLPALIGWSAVKRFGGNPLLGIVLGVMLVHP 200
||||||||||||||||||.||||||||||||||||:||||||||:|||||
RBAM_007970__ 151 PQWADLANMINLIAGTAFAFLPALIGWSAVKRFGGSPLLGIVLGLMLVHP 200
BSNT_01300___ 201 DLLNAWGYGAAEQSGEIPVWNLFGLEVQKVGYQGQVLPILLASYMLAKIE 250
|||||||||||||||:||||||||||||||||||||||||||||:||::|
RBAM_007970__ 201 DLLNAWGYGAAEQSGDIPVWNLFGLEVQKVGYQGQVLPILLASYLLARLE 250
BSNT_01300___ 251 VFLTKRTPEGIQLLVVAPITLLLTGFASFIIIGPITFAIGNVLTSGLISV 300
:|||||||||||||||||:|||:.||.||:|||||||||||.||:|||:|
RBAM_007970__ 251 LFLTKRTPEGIQLLVVAPVTLLVIGFLSFVIIGPITFAIGNALTAGLIAV 300
BSNT_01300___ 301 FGSFAALGGLLYGGFYSALVITGMHHTFLAVDLQLIGSKLGGTFLWPMLA 350
||.|:|:|||||||.|||||||||||||||||||||||||||||||||||
RBAM_007970__ 301 FGQFSAIGGLLYGGLYSALVITGMHHTFLAVDLQLIGSKLGGTFLWPMLA 350
BSNT_01300___ 351 LSNIAQGSAALAMMFIVKDEKQKGLSLTSGISAYLGITEPAIFGVNLRYR 400
||||||||||||||.|.||:||:|||||:||||||||||||||||||||:
RBAM_007970__ 351 LSNIAQGSAALAMMLITKDKKQRGLSLTAGISAYLGITEPAIFGVNLRYK 400
BSNT_01300___ 401 FPFIIAMVSSGLAGMYISSQGVLASSVGVGGVPGIFSIMSQYWGAFAIGM 450
|||:|||:|||:|||:||.:||||||||||||||||||||||||.|||||
RBAM_007970__ 401 FPFVIAMISSGIAGMFISVKGVLASSVGVGGVPGIFSIMSQYWGPFAIGM 450
BSNT_01300___ 451 AIVLIVPFAGTYAYARFKHK- 470
.||||:||||||.|||.|.:
RBAM_007970__ 451 LIVLILPFAGTYGYARLKRQK 471
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