Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00962 and RBAM_007940

See DNA alignment / Visit BSNT_00962 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:39
# Commandline: needle
#    -asequence pep-align/BSNT_00962___cotP.1.9828.seq
#    -bsequence pep-align/RBAM_007940___cotP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00962___cotP-RBAM_007940___cotP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00962___cotP-RBAM_007940___cotP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00962___cotP
# 2: RBAM_007940___cotP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:      95/143 (66.4%)
# Similarity:   114/143 (79.7%)
# Gaps:           0/143 ( 0.0%)
# Score: 512.0
# 
#
#=======================================

BSNT_00962___      1 MDFEKIRKWLEITNEYKQSDFWTNVLKYKAPEHFFDSEASTFVYDFYQDE     50
                     ||.||:|||||||||:|.|||||||||.|:||.||..:.:|..||.||||
RBAM_007940__      1 MDIEKMRKWLEITNEHKPSDFWTNVLKRKSPEDFFSLQKNTLTYDIYQDE     50

BSNT_00962___     51 EYNFIIVEMPGVYEEELTIRLLSKTQLLIKGTITPVFPAEMEVMRERYYG    100
                     ::.|:|||||||||||||:||||:|:|.|:|.|||:||..|.|.:.||||
RBAM_007940__     51 QHTFVIVEMPGVYEEELTLRLLSRTRLHIRGNITPLFPKNMGVCQNRYYG    100

BSNT_00962___    101 EIERIIQLPEAAESHLLQIQLLNGLLHISYPRQIETIAFNKGL    143
                     ||:..|:|||.||.||||.|.:||||||||||.:|.|.|.|.:
RBAM_007940__    101 EIDETIELPEPAEPHLLQAQCVNGLLHISYPRLMEHIPFQKKI    143


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