Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01294 and RBAM_007930

See DNA alignment / Visit BSNT_01294 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence pep-align/BSNT_01294.1.9828.seq
#    -bsequence pep-align/RBAM_007930___yflB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01294-RBAM_007930___yflB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01294-RBAM_007930___yflB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01294
# 2: RBAM_007930___yflB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 131
# Identity:      93/131 (71.0%)
# Similarity:   109/131 (83.2%)
# Gaps:           6/131 ( 4.6%)
# Score: 487.0
# 
#
#=======================================

BSNT_01294         1 MMDFSHIVSEDKIKRAIKDGDFQNLPGMGKPLPKDDAAHLPESLRMGYRI     50
                      ||.:|||:|||||||||||:|..:.||||||||||||||||||||||||
RBAM_007930__      1 -MDIAHIVAEDKIKRAIKDGEFAGIKGMGKPLPKDDAAHLPESLRMGYRI     49

BSNT_01294        51 LKNAGMAEDEGALKKELMTIDHLIEKCYDEKEREQLIRKKSEKQLLLDKL    100
                     |||||:|||||||||||||:|:||.||.:|:||:.|..|::|||:.||||
RBAM_007930__     50 LKNAGIAEDEGALKKELMTLDYLIAKCRNEQERDHLRNKRTEKQVRLDKL     99

BSNT_01294       101 VDKKGMFSKPASAFYKNKVYDRLGRNRPSSS    131
                     .::|.|||||||:.||.|||.||||.     
RBAM_007930__    100 TEEKAMFSKPASSHYKEKVYRRLGRP-----    125


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