Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01294 and RBAM_007930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence dna-align/BSNT_01294.1.9828.seq
# -bsequence dna-align/RBAM_007930___yflB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01294-RBAM_007930___yflB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01294-RBAM_007930___yflB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01294
# 2: RBAM_007930___yflB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 416
# Identity: 280/416 (67.3%)
# Similarity: 280/416 (67.3%)
# Gaps: 58/416 (13.9%)
# Score: 937.5
#
#
#=======================================
BSNT_01294 1 ATGATGGATTTTTCCCATATTGTGTCTGAAGATAAAATTAAGCGCGCCAT 50
||||||.||.|||||||.|||.|||||||||||||.|||||||||||
RBAM_007930__ 1 ---ATGGATATTGCCCATATCGTGGCTGAAGATAAAATCAAGCGCGCCAT 47
BSNT_01294 51 CAAAGACGGGGACTT--------TCAAAACCTCCCGGGAATGGGGAAGCC 92
.||.||.||.||.|| ||||| ||||||||.|||||
RBAM_007930__ 48 TAAGGATGGAGAGTTCGCCGGCATCAAA--------GGAATGGGAAAGCC 89
BSNT_01294 93 GCTGCCGAAGGATGACGCGGCACA-CTTGCCGGAATCGCTGCGCATGGGC 141
.||||||||.||.||.||.||||| ||| |||||.|||||..|.||||||
RBAM_007930__ 90 CCTGCCGAAAGACGATGCCGCACATCTT-CCGGAGTCGCTCAGAATGGGC 138
BSNT_01294 142 TATCGTATTTTGAAAAACGCGGGAATGGCAGAGGACGAGGGCGCGCTCAA 191
||.||.||.||.||||||||.||.||.||.|||||.|||||||||||.||
RBAM_007930__ 139 TACCGCATATTAAAAAACGCCGGGATCGCCGAGGATGAGGGCGCGCTGAA 188
BSNT_01294 192 AAAAGAGCTTATGACCATCGACCATTTAATCGAAAAGTGCTATGACGAAA 241
.||||||||.|||||..||||..||||.||||..||||||....|.|||.
RBAM_007930__ 189 GAAAGAGCTGATGACGCTCGATTATTTGATCGCCAAGTGCCGCAATGAAC 238
BSNT_01294 242 AAGAACGCGAGCAATTAATCAGAAAAAA---ATCTGAAAAGCAATTGCTG 288
|.||.||.||.||.|| .|.|||.||| | |.|||||.|||.| |.|
RBAM_007930__ 239 AGGAGCGGGATCACTT--GCGGAACAAACGGA-CGGAAAAACAAGT-CAG 284
BSNT_01294 289 -CTTGATAAGCTTGTC-GACAAAAAAGGCATGTTTTCAAAGCCAGCATCC 336
||.||.||.| ||.| ||..|.||||.||||||.|||||.||.|||||.
RBAM_007930__ 285 ACTCGACAAAC-TGACGGAGGAGAAAGCCATGTTCTCAAAACCCGCATCT 333
BSNT_01294 337 GCTTTTTATAAGAATAAAGTATA-TGACCGGCTTGGACG-----AAACAG 380
.||..|||||||.|.|||||.|| .|| |||||.||.|| ||
RBAM_007930__ 334 TCTCATTATAAGGAGAAAGTGTACAGA-CGGCTGGGCCGCCCGTAA---- 378
BSNT_01294 381 ACCTTCTTCCAGCTGA 396
RBAM_007930__ 378 ---------------- 378
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