Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01288 and RBAM_007880

See DNA alignment / Visit BSNT_01288 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence pep-align/BSNT_01288___yflH.1.9828.seq
#    -bsequence pep-align/RBAM_007880___yflH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01288___yflH-RBAM_007880___yflH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01288___yflH-RBAM_007880___yflH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01288___yflH
# 2: RBAM_007880___yflH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 104
# Identity:      72/104 (69.2%)
# Similarity:    88/104 (84.6%)
# Gaps:           1/104 ( 1.0%)
# Score: 389.0
# 
#
#=======================================

BSNT_01288___      1 MHRDQEKIQIENEINAMHGTIKEDILKDFEEFKGYLKKQVNRGKKLGLDD     50
                     |.:|:|||:|||||:||||..|:.||:||||||.||.::::.||||||||
RBAM_007880__      1 MKKDKEKIKIENEIHAMHGVTKQQILEDFEEFKAYLHQKISAGKKLGLDD     50

BSNT_01288___     51 GKLVKSAAILGDYLAKHEEPQNGEEMLLQELWSVADEGEKEHLAQLLVKL    100
                     .|::||||||||||||||||:|.||.||||||.:||:.||:|||||||||
RBAM_007880__     51 SKIIKSAAILGDYLAKHEEPRNAEEKLLQELWDIADDNEKQHLAQLLVKL    100

BSNT_01288___    101 VDKQ    104
                     ... 
RBAM_007880__    101 AGH-    103


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