Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01279 and RBAM_007820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:57
# Commandline: needle
# -asequence pep-align/BSNT_01279___yflN.1.9828.seq
# -bsequence pep-align/RBAM_007820___yflN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01279___yflN-RBAM_007820___yflN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01279___yflN-RBAM_007820___yflN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01279___yflN
# 2: RBAM_007820___yflN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity: 201/265 (75.8%)
# Similarity: 229/265 (86.4%)
# Gaps: 2/265 ( 0.8%)
# Score: 1081.0
#
#
#=======================================
BSNT_01279___ 1 MSDPYMPLTSVRSGTGFEAAKGVHGLTVQIANVYFIQLPSEPHSFVLIDA 50
||||:|||.|||||.||:||.||:||||||||||||:.||.|...:|:||
RBAM_007820__ 1 MSDPFMPLFSVRSGAGFKAADGVYGLTVQIANVYFIENPSAPREIILVDA 50
BSNT_01279___ 51 GMPQSAGMIVNEAKQRFGEGFQLKAIILTHGHFDHIGAIEEILEHWDVPV 100
||||||.||..|.|:||.||:||||:|||||||||:|||||:||.|||||
RBAM_007820__ 51 GMPQSAEMITEEMKRRFKEGYQLKAVILTHGHFDHVGAIEELLEFWDVPV 100
BSNT_01279___ 101 YVHSREMPYVTGKEDYPPARPDSKSGLVAKLSPLFPRHSIDISSHVQALP 150
|:|.:|:||||||.||||||||:|.|||||||||||||:|.|.| |||||
RBAM_007820__ 101 YIHEKELPYVTGKADYPPARPDAKKGLVAKLSPLFPRHTIRIPS-VQALP 149
BSNT_01279___ 151 EDGSVPFLDEWMWIATPGHTPGYISLFRDDGRVLVAGDAVITVEQEKMAD 200
.||:||||:||.|:.|||||||:||||||..|||:|||||||||||.:||
RBAM_007820__ 150 SDGTVPFLEEWRWVHTPGHTPGHISLFRDKDRVLLAGDAVITVEQESLAD 199
BSNT_01279___ 201 VLIQKQELHGPPAYFTPDTETAAESILKLAGLEPEALLTGHGIPMTGKNF 250
|:||||||||||||||.||:|||.|:.|||.||||||||||||||||||:
RBAM_007820__ 200 VVIQKQELHGPPAYFTADTQTAAASVQKLAELEPEALLTGHGIPMTGKNY 249
BSNT_01279___ 251 RSDLTELANRLSSI- 264
|.||..||.:|.|:
RBAM_007820__ 250 REDLLTLAEKLHSVL 264
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